RNA–Protein interactions for RNA: ENST00000479429.5

WDR4-206, Transcript of WD repeat domain 4, humanhuman

TSL 5

Gene WDR4, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR4-206ENST00000479429 NISCHQ9Y2I1 1504 aa54.03■■■■■ 6.24
WDR4-206ENST00000479429 CCDC180Q9P1Z9 1646 aa48.07■■■■■ 5.29
WDR4-206ENST00000479429 ABCC9O60706 1549 aa46.95■■■■■ 5.11
WDR4-206ENST00000479429 RB1CC1Q8TDY2 1594 aa45.15■■■■■ 4.82
WDR4-206ENST00000479429 NACADO15069 1562 aa45.07■■■■■ 4.81
WDR4-206ENST00000479429 ZCCHC6Q5VYS8 1495 aaKnown RBP45.05■■■■■ 4.8
WDR4-206ENST00000479429 DCAF8L2P0C7V8 631 aa45.02■■■■■ 4.8
WDR4-206ENST00000479429 MYO15BQ96JP2 1530 aa44.77■■■■■ 4.76
WDR4-206ENST00000479429 DCAF1Q9Y4B6 1507 aa44.65■■■■■ 4.74
WDR4-206ENST00000479429 UNC13AQ9UPW8 1703 aa44.35■■■■■ 4.69
WDR4-206ENST00000479429 SCRIBQ14160 1630 aa43.93■■■■■ 4.62
WDR4-206ENST00000479429 BICRAQ9NZM4 1560 aa43.88■■■■■ 4.61
WDR4-206ENST00000479429 PABPN1Q86U42 306 aaKnown RBP eCLIP43.82■■■■■ 4.61
WDR4-206ENST00000479429 SHROOM4Q9ULL8 1493 aa43.25■■■■■ 4.51
WDR4-206ENST00000479429 DNAJC5BQ9UF47 199 aa42.98■■■■■ 4.47
WDR4-206ENST00000479429 EIF4G1Q04637 1599 aaKnown RBP42.66■■■■■ 4.42
WDR4-206ENST00000479429 CC2D2AQ9P2K1 1620 aa42.49■■■■■ 4.39
WDR4-206ENST00000479429 CECR2Q9BXF3 1484 aa42.13■■■■■ 4.34
WDR4-206ENST00000479429 SMARCA4P51532 1647 aa41.98■■■■■ 4.31
WDR4-206ENST00000479429 BAZ1AQ9NRL2 1556 aaPredicted RBP41.86■■■■■ 4.29
WDR4-206ENST00000479429 MROH2BQ7Z745 1585 aa41.7■■■■■ 4.27
WDR4-206ENST00000479429 ATAD2BQ9ULI0 1458 aa41.65■■■■■ 4.26
WDR4-206ENST00000479429 SMARCA2P51531 1590 aa41.59■■■■■ 4.25
WDR4-206ENST00000479429 NCAPD3P42695 1498 aa41.55■■■■■ 4.24
WDR4-206ENST00000479429 PEG3Q9GZU2 1588 aa41.5■■■■■ 4.23
WDR4-206ENST00000479429 HMGXB3Q12766 1538 aa41.44■■■■■ 4.22
WDR4-206ENST00000479429 BAZ1BQ9UIG0 1483 aaKnown RBP41.32■■■■■ 4.2
WDR4-206ENST00000479429 WIZO95785 1651 aa41.32■■■■■ 4.2
WDR4-206ENST00000479429 RSF1Q96T23 1441 aaPredicted RBP41.18■■■■■ 4.18
WDR4-206ENST00000479429 TOP2AP11388 1531 aaKnown RBP40.8■■■■■ 4.12
WDR4-206ENST00000479429 NESP48681 1621 aa40.69■■■■■ 4.1
WDR4-206ENST00000479429 LAMC3Q9Y6N6 1575 aa40.52■■■■■ 4.08
WDR4-206ENST00000479429 ERCC6Q03468 1493 aa40.4■■■■■ 4.06
WDR4-206ENST00000479429 CADPSQ9ULU8 1353 aa40.34■■■■■ 4.05
WDR4-206ENST00000479429 KIF21AQ7Z4S6 1674 aa40.3■■■■■ 4.04
WDR4-206ENST00000479429 CCDC88BA6NC98 1476 aa40.29■■■■■ 4.04
WDR4-206ENST00000479429 SUPT5HO00267 1087 aaKnown RBP40.16■■■■■ 4.02
WDR4-206ENST00000479429 CFTRP13569 1480 aa40.15■■■■■ 4.02
WDR4-206ENST00000479429 PDS5BQ9NTI5 1447 aa40.15■■■■■ 4.02
WDR4-206ENST00000479429 THOC2Q8NI27 1593 aaKnown RBP40.1■■■■■ 4.01
WDR4-206ENST00000479429 PRDM2Q13029 1718 aa40.06■■■■■ 4
WDR4-206ENST00000479429 FANCD2Q9BXW9 1451 aa39.95■■■■□ 3.99
WDR4-206ENST00000479429 CUX2O14529 1486 aa39.92■■■■□ 3.98
WDR4-206ENST00000479429 CEP164Q9UPV0 1460 aa39.9■■■■□ 3.98
WDR4-206ENST00000479429 MRC2Q9UBG0 1479 aa39.82■■■■□ 3.97
WDR4-206ENST00000479429 WDR62O43379 1518 aa39.72■■■■□ 3.95
WDR4-206ENST00000479429 URB2Q14146 1524 aaKnown RBP39.6■■■■□ 3.93
WDR4-206ENST00000479429 TOPBP1Q92547 1522 aa39.35■■■■□ 3.89
WDR4-206ENST00000479429 DNMBPQ6XZF7 1577 aa39.33■■■■□ 3.89
WDR4-206ENST00000479429 ABCC8Q09428 1581 aa39.21■■■■□ 3.87
WDR4-206ENST00000479429 CUX1P39880 1505 aa39.12■■■■□ 3.85
WDR4-206ENST00000479429 POLA1P09884 1462 aaPredicted RBP39.02■■■■□ 3.84
WDR4-206ENST00000479429 IFT140Q96RY7 1462 aa39.02■■■■□ 3.84
WDR4-206ENST00000479429 TARBP1Q13395 1621 aaKnown RBP38.96■■■■□ 3.83
WDR4-206ENST00000479429 FGD5Q6ZNL6 1462 aa38.95■■■■□ 3.83
WDR4-206ENST00000479429 ZNF608Q9ULD9 1512 aaPredicted RBP38.94■■■■□ 3.82
WDR4-206ENST00000479429 RAD54L2Q9Y4B4 1467 aa38.86■■■■□ 3.81
WDR4-206ENST00000479429 SYNJ1O43426 1573 aa38.84■■■■□ 3.81
WDR4-206ENST00000479429 EIF4G3O43432 1585 aaKnown RBP38.84■■■■□ 3.81
WDR4-206ENST00000479429 BIVM-ERCC5R4GMW8 1640 aa38.82■■■■□ 3.81
WDR4-206ENST00000479429 WRNQ14191 1432 aaPredicted RBP eCLIP38.8■■■■□ 3.8
WDR4-206ENST00000479429 TOP2BQ02880 1626 aa38.78■■■■□ 3.8
WDR4-206ENST00000479429 SOGA1O94964 1423 aa38.78■■■■□ 3.8
WDR4-206ENST00000479429 WDR97A6NE52 1622 aa38.74■■■■□ 3.79
WDR4-206ENST00000479429 AQRO60306 1485 aaKnown RBP eCLIP38.67■■■■□ 3.781e-7■■■■□ 21.6
WDR4-206ENST00000479429 TDRD9Q8NDG6 1382 aaKnown RBP38.59■■■■□ 3.77
WDR4-206ENST00000479429 DNAJC5Q9H3Z4 198 aa38.53■■■■□ 3.76
WDR4-206ENST00000479429 ABCA10Q8WWZ4 1543 aa38.53■■■■□ 3.76
WDR4-206ENST00000479429 ABCA5Q8WWZ7 1642 aa38.47■■■■□ 3.75
WDR4-206ENST00000479429 PBRM1Q86U86 1689 aa38.46■■■■□ 3.75
WDR4-206ENST00000479429 CHD1O14646 1710 aa38.39■■■■□ 3.74
WDR4-206ENST00000479429 GAPVD1Q14C86 1478 aa38.37■■■■□ 3.73
WDR4-206ENST00000479429 SNAPC4Q5SXM2 1469 aa38.35■■■■□ 3.73
WDR4-206ENST00000479429 GRIN2BQ13224 1484 aa38.34■■■■□ 3.73
WDR4-206ENST00000479429 MAGI1Q96QZ7 1491 aaPredicted RBP38.23■■■■□ 3.71
WDR4-206ENST00000479429 OSCARQ8IYS5 282 aa38.17■■■■□ 3.7
WDR4-206ENST00000479429 FBLN2P98095 1184 aa38.12■■■■□ 3.69
WDR4-206ENST00000479429 ADAMTS12P58397 1594 aa38.1■■■■□ 3.69
WDR4-206ENST00000479429 SYNJ2O15056 1496 aa38.09■■■■□ 3.69
WDR4-206ENST00000479429 ERICH3Q5RHP9 1530 aa38.07■■■■□ 3.68
WDR4-206ENST00000479429 CHMP7Q8WUX9 453 aaPredicted RBP37.98■■■■□ 3.67
WDR4-206ENST00000479429 KIF27Q86VH2 1401 aa37.95■■■■□ 3.67
WDR4-206ENST00000479429 FHAD1B1AJZ9 1412 aa37.9■■■■□ 3.66
WDR4-206ENST00000479429 GRIN2AQ12879 1464 aa37.89■■■■□ 3.66
WDR4-206ENST00000479429 CLASP1Q7Z460 1538 aa37.87■■■■□ 3.65
WDR4-206ENST00000479429 TRIM41Q8WV44 630 aa37.85■■■■□ 3.65
WDR4-206ENST00000479429 CUL7Q14999 1698 aa37.8■■■■□ 3.64
WDR4-206ENST00000479429 RIMBP3CA6NJZ7 1639 aa37.79■■■■□ 3.64
WDR4-206ENST00000479429 RIMBP3BA6NNM3 1639 aa37.79■■■■□ 3.64
WDR4-206ENST00000479429 RIMBP3Q9UFD9 1639 aa37.79■■■■□ 3.64
WDR4-206ENST00000479429 IGF1RP08069 1367 aa37.79■■■■□ 3.64
WDR4-206ENST00000479429 CEP170Q5SW79 1584 aa37.78■■■■□ 3.64
WDR4-206ENST00000479429 RUSC2Q8N2Y8 1516 aa37.77■■■■□ 3.64
WDR4-206ENST00000479429 ARHGEF11O15085 1522 aa37.74■■■■□ 3.63
WDR4-206ENST00000479429 NUP160Q12769 1436 aa37.7■■■■□ 3.62
WDR4-206ENST00000479429 CARMIL1Q5VZK9 1371 aa37.55■■■■□ 3.6
WDR4-206ENST00000479429 CHIC1Q5VXU3 224 aa37.5■■■■□ 3.59
WDR4-206ENST00000479429 SHROOM2Q13796 1616 aa37.49■■■■□ 3.59
WDR4-206ENST00000479429 ARAP1Q96P48 1450 aa37.46■■■■□ 3.59
WDR4-206ENST00000479429 ERCC6L2Q5T890 1561 aa37.43■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms