RNA–Protein interactions for RNA: ENST00000591762.1

SPHK1-209, Transcript of sphingosine kinase 1, humanhuman

TSL 2

Gene SPHK1, Length 2,502 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-209ENST00000591762 NISCHQ9Y2I1 1504 aa37.91■■■■□ 3.66
SPHK1-209ENST00000591762 CCDC180Q9P1Z9 1646 aa32.5■■■□□ 2.79
SPHK1-209ENST00000591762 ZCCHC6Q5VYS8 1495 aaKnown RBP31.92■■■□□ 2.7
SPHK1-209ENST00000591762 SHROOM4Q9ULL8 1493 aa31.88■■■□□ 2.69
SPHK1-209ENST00000591762 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
SPHK1-209ENST00000591762 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
SPHK1-209ENST00000591762 SUPT5HO00267 1087 aaKnown RBP30.98■■■□□ 2.55
SPHK1-209ENST00000591762 ABCC9O60706 1549 aa30.72■■■□□ 2.51
SPHK1-209ENST00000591762 MYO15BQ96JP2 1530 aa30.43■■■□□ 2.46
SPHK1-209ENST00000591762 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
SPHK1-209ENST00000591762 NACADO15069 1562 aa30.23■■■□□ 2.43
SPHK1-209ENST00000591762 RB1CC1Q8TDY2 1594 aa29.88■■■□□ 2.37
SPHK1-209ENST00000591762 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
SPHK1-209ENST00000591762 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.35
SPHK1-209ENST00000591762 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
SPHK1-209ENST00000591762 MROH2BQ7Z745 1585 aa29.44■■■□□ 2.3
SPHK1-209ENST00000591762 UNC13AQ9UPW8 1703 aa29.37■■■□□ 2.29
SPHK1-209ENST00000591762 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.283e-7■■■□□ 17.7
SPHK1-209ENST00000591762 WIZO95785 1651 aa29.24■■■□□ 2.27
SPHK1-209ENST00000591762 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
SPHK1-209ENST00000591762 HRCP23327 699 aa29.08■■■□□ 2.25
SPHK1-209ENST00000591762 BICRAQ9NZM4 1560 aa29.07■■■□□ 2.24
SPHK1-209ENST00000591762 SMARCA4P51532 1647 aa28.99■■■□□ 2.23
SPHK1-209ENST00000591762 PCGF6Q9BYE7 350 aa28.95■■■□□ 2.22
SPHK1-209ENST00000591762 TRIM41Q8WV44 630 aa28.91■■■□□ 2.22
SPHK1-209ENST00000591762 LOC105371045A0A1W2PR82 267 aa28.9■■■□□ 2.22
SPHK1-209ENST00000591762 TOP2AP11388 1531 aaKnown RBP28.77■■■□□ 2.2
SPHK1-209ENST00000591762 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
SPHK1-209ENST00000591762 FAM9AQ8IZU1 332 aaPredicted RBP28.66■■■□□ 2.18
SPHK1-209ENST00000591762 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
SPHK1-209ENST00000591762 PPARGC1BQ86YN6 1023 aaKnown RBP28.57■■■□□ 2.16
SPHK1-209ENST00000591762 EIF4G1Q04637 1599 aaKnown RBP28.51■■■□□ 2.15
SPHK1-209ENST00000591762 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.15
SPHK1-209ENST00000591762 EHMT2Q96KQ7 1210 aa28.44■■■□□ 2.14
SPHK1-209ENST00000591762 ATAD2BQ9ULI0 1458 aa28.43■■■□□ 2.14
SPHK1-209ENST00000591762 ABCC8Q09428 1581 aa28.36■■■□□ 2.13
SPHK1-209ENST00000591762 BAZ1BQ9UIG0 1483 aaKnown RBP28.32■■■□□ 2.12
SPHK1-209ENST00000591762 TRIM26Q12899 539 aaPredicted RBP28.19■■■□□ 2.1
SPHK1-209ENST00000591762 NCAPD3P42695 1498 aa27.99■■■□□ 2.07
SPHK1-209ENST00000591762 SOGA1O94964 1423 aa27.98■■■□□ 2.07
SPHK1-209ENST00000591762 WRNQ14191 1432 aaPredicted RBP eCLIP27.98■■■□□ 2.07
SPHK1-209ENST00000591762 HMGXB3Q12766 1538 aa27.91■■■□□ 2.06
SPHK1-209ENST00000591762 RUSC2Q8N2Y8 1516 aa27.88■■■□□ 2.05
SPHK1-209ENST00000591762 SYNJ1O43426 1573 aa27.84■■■□□ 2.05
SPHK1-209ENST00000591762 CSRNP3Q8WYN3 585 aa27.79■■■□□ 2.04
SPHK1-209ENST00000591762 EEA1Q15075 1411 aa27.7■■■□□ 2.02
SPHK1-209ENST00000591762 ZEB1P37275 1124 aaPredicted RBP27.66■■■□□ 2.02
SPHK1-209ENST00000591762 UBTFP17480 764 aaKnown RBP27.65■■■□□ 2.02
SPHK1-209ENST00000591762 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
SPHK1-209ENST00000591762 CFTRP13569 1480 aa27.58■■■□□ 2.01
SPHK1-209ENST00000591762 TOP2BQ02880 1626 aa27.55■■■□□ 2
SPHK1-209ENST00000591762 TNIKQ9UKE5 1360 aa27.54■■■□□ 2
SPHK1-209ENST00000591762 CEP162Q5TB80 1403 aa27.53■■■□□ 2
SPHK1-209ENST00000591762 GOLGA3Q08378 1498 aa27.49■■□□□ 1.99
SPHK1-209ENST00000591762 CUX1P39880 1505 aa27.45■■□□□ 1.98
SPHK1-209ENST00000591762 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
SPHK1-209ENST00000591762 CADPSQ9ULU8 1353 aa27.43■■□□□ 1.98
SPHK1-209ENST00000591762 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
SPHK1-209ENST00000591762 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
SPHK1-209ENST00000591762 TTBK1Q5TCY1 1321 aaPredicted RBP27.33■■□□□ 1.97
SPHK1-209ENST00000591762 KIF21BO75037 1637 aa27.33■■□□□ 1.97
SPHK1-209ENST00000591762 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
SPHK1-209ENST00000591762 RANGAP1P46060 587 aaPredicted RBP27.29■■□□□ 1.96
SPHK1-209ENST00000591762 PRDM2Q13029 1718 aa27.25■■□□□ 1.95
SPHK1-209ENST00000591762 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
SPHK1-209ENST00000591762 KIF27Q86VH2 1401 aa27.18■■□□□ 1.94
SPHK1-209ENST00000591762 CLIP1P30622 1438 aa27.17■■□□□ 1.94
SPHK1-209ENST00000591762 NESP48681 1621 aa27.17■■□□□ 1.94
SPHK1-209ENST00000591762 FANCD2Q9BXW9 1451 aa27.15■■□□□ 1.94
SPHK1-209ENST00000591762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.13■■□□□ 1.93
SPHK1-209ENST00000591762 PRXQ9BXM0 1461 aa27.12■■□□□ 1.93
SPHK1-209ENST00000591762 FGD5Q6ZNL6 1462 aa27.07■■□□□ 1.92
SPHK1-209ENST00000591762 SCAF1Q9H7N4 1312 aaKnown RBP27.06■■□□□ 1.92
SPHK1-209ENST00000591762 CUX2O14529 1486 aa27.06■■□□□ 1.92
SPHK1-209ENST00000591762 CCER1Q8TC90 406 aaPredicted RBP27.05■■□□□ 1.92
SPHK1-209ENST00000591762 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
SPHK1-209ENST00000591762 IGF1RP08069 1367 aa26.96■■□□□ 1.91
SPHK1-209ENST00000591762 VPS8Q8N3P4 1428 aa26.95■■□□□ 1.9
SPHK1-209ENST00000591762 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
SPHK1-209ENST00000591762 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
SPHK1-209ENST00000591762 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
SPHK1-209ENST00000591762 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
SPHK1-209ENST00000591762 APLP2Q06481 763 aa26.87■■□□□ 1.89
SPHK1-209ENST00000591762 POLA1P09884 1462 aaPredicted RBP26.84■■□□□ 1.89
SPHK1-209ENST00000591762 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.89
SPHK1-209ENST00000591762 ARAP1Q96P48 1450 aa26.79■■□□□ 1.88
SPHK1-209ENST00000591762 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
SPHK1-209ENST00000591762 PDS5BQ9NTI5 1447 aa26.77■■□□□ 1.88
SPHK1-209ENST00000591762 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
SPHK1-209ENST00000591762 ARHGAP35Q9NRY4 1499 aa26.68■■□□□ 1.86
SPHK1-209ENST00000591762 DIEXFQ68CQ4 756 aaKnown RBP26.67■■□□□ 1.86
SPHK1-209ENST00000591762 KIF21AQ7Z4S6 1674 aa26.65■■□□□ 1.86
SPHK1-209ENST00000591762 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
SPHK1-209ENST00000591762 NEUROD1Q13562 356 aa26.64■■□□□ 1.85
SPHK1-209ENST00000591762 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
SPHK1-209ENST00000591762 HNRNPUL2Q1KMD3 747 aaKnown RBP26.63■■□□□ 1.85
SPHK1-209ENST00000591762 KANK4Q5T7N3 995 aaPredicted RBP26.62■■□□□ 1.85
SPHK1-209ENST00000591762 P3H3Q8IVL6 736 aa26.56■■□□□ 1.84
SPHK1-209ENST00000591762 WDR97A6NE52 1622 aa26.49■■□□□ 1.83
SPHK1-209ENST00000591762 GAPVD1Q14C86 1478 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms