RNA–Protein interactions for RNA: ENST00000591651.5

SPHK1-208, Transcript of sphingosine kinase 1, humanhuman

TSL 4

Gene SPHK1, Length 541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-208ENST00000591651 NISCHQ9Y2I1 1504 aa50.44■■■■■ 5.67
SPHK1-208ENST00000591651 CCDC180Q9P1Z9 1646 aa44.74■■■■■ 4.75
SPHK1-208ENST00000591651 ABCC9O60706 1549 aa43.68■■■■■ 4.58
SPHK1-208ENST00000591651 DCAF8L2P0C7V8 631 aa42.12■■■■■ 4.33
SPHK1-208ENST00000591651 RB1CC1Q8TDY2 1594 aa42.08■■■■■ 4.33
SPHK1-208ENST00000591651 NACADO15069 1562 aa42.07■■■■■ 4.33
SPHK1-208ENST00000591651 ZCCHC6Q5VYS8 1495 aaKnown RBP42.06■■■■■ 4.32
SPHK1-208ENST00000591651 MYO15BQ96JP2 1530 aa41.88■■■■■ 4.29
SPHK1-208ENST00000591651 DCAF1Q9Y4B6 1507 aa41.75■■■■■ 4.27
SPHK1-208ENST00000591651 UNC13AQ9UPW8 1703 aa40.98■■■■■ 4.15
SPHK1-208ENST00000591651 SCRIBQ14160 1630 aa40.85■■■■■ 4.13
SPHK1-208ENST00000591651 PABPN1Q86U42 306 aaKnown RBP eCLIP40.85■■■■■ 4.13
SPHK1-208ENST00000591651 BICRAQ9NZM4 1560 aa40.75■■■■■ 4.11
SPHK1-208ENST00000591651 SHROOM4Q9ULL8 1493 aa40.43■■■■■ 4.06
SPHK1-208ENST00000591651 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
SPHK1-208ENST00000591651 EIF4G1Q04637 1599 aaKnown RBP39.7■■■■□ 3.95
SPHK1-208ENST00000591651 CC2D2AQ9P2K1 1620 aa39.48■■■■□ 3.91
SPHK1-208ENST00000591651 CECR2Q9BXF3 1484 aa39.26■■■■□ 3.88
SPHK1-208ENST00000591651 BAZ1AQ9NRL2 1556 aaPredicted RBP39.1■■■■□ 3.85
SPHK1-208ENST00000591651 SMARCA4P51532 1647 aa39.09■■■■□ 3.85
SPHK1-208ENST00000591651 ATAD2BQ9ULI0 1458 aa38.87■■■■□ 3.81
SPHK1-208ENST00000591651 MROH2BQ7Z745 1585 aa38.86■■■■□ 3.81
SPHK1-208ENST00000591651 SMARCA2P51531 1590 aa38.84■■■■□ 3.81
SPHK1-208ENST00000591651 NCAPD3P42695 1498 aa38.83■■■■□ 3.81
SPHK1-208ENST00000591651 PEG3Q9GZU2 1588 aa38.71■■■■□ 3.79
SPHK1-208ENST00000591651 HMGXB3Q12766 1538 aa38.65■■■■□ 3.78
SPHK1-208ENST00000591651 BAZ1BQ9UIG0 1483 aaKnown RBP38.58■■■■□ 3.77
SPHK1-208ENST00000591651 RSF1Q96T23 1441 aaPredicted RBP38.5■■■■□ 3.75
SPHK1-208ENST00000591651 WIZO95785 1651 aa38.41■■■■□ 3.74
SPHK1-208ENST00000591651 TOP2AP11388 1531 aaKnown RBP38.07■■■■□ 3.69
SPHK1-208ENST00000591651 NESP48681 1621 aa37.82■■■■□ 3.64
SPHK1-208ENST00000591651 LAMC3Q9Y6N6 1575 aa37.76■■■■□ 3.64
SPHK1-208ENST00000591651 CADPSQ9ULU8 1353 aa37.72■■■■□ 3.63
SPHK1-208ENST00000591651 ERCC6Q03468 1493 aa37.68■■■■□ 3.62
SPHK1-208ENST00000591651 SUPT5HO00267 1087 aaKnown RBP37.66■■■■□ 3.62
SPHK1-208ENST00000591651 CCDC88BA6NC98 1476 aa37.62■■■■□ 3.61
SPHK1-208ENST00000591651 PDS5BQ9NTI5 1447 aa37.55■■■■□ 3.6
SPHK1-208ENST00000591651 CFTRP13569 1480 aa37.52■■■■□ 3.6
SPHK1-208ENST00000591651 KIF21AQ7Z4S6 1674 aa37.31■■■■□ 3.56
SPHK1-208ENST00000591651 FANCD2Q9BXW9 1451 aa37.28■■■■□ 3.56
SPHK1-208ENST00000591651 CEP164Q9UPV0 1460 aa37.23■■■■□ 3.55
SPHK1-208ENST00000591651 CUX2O14529 1486 aa37.21■■■■□ 3.55
SPHK1-208ENST00000591651 THOC2Q8NI27 1593 aaKnown RBP37.21■■■■□ 3.55
SPHK1-208ENST00000591651 MRC2Q9UBG0 1479 aa37.14■■■■□ 3.54
SPHK1-208ENST00000591651 PRDM2Q13029 1718 aa37.13■■■■□ 3.53
SPHK1-208ENST00000591651 WDR62O43379 1518 aa36.99■■■■□ 3.51
SPHK1-208ENST00000591651 URB2Q14146 1524 aaKnown RBP36.87■■■■□ 3.49
SPHK1-208ENST00000591651 ABCC8Q09428 1581 aa36.72■■■■□ 3.47
SPHK1-208ENST00000591651 TOPBP1Q92547 1522 aa36.69■■■■□ 3.46
SPHK1-208ENST00000591651 DNMBPQ6XZF7 1577 aa36.66■■■■□ 3.46
SPHK1-208ENST00000591651 CUX1P39880 1505 aa36.46■■■■□ 3.43
SPHK1-208ENST00000591651 IFT140Q96RY7 1462 aa36.44■■■■□ 3.42
SPHK1-208ENST00000591651 POLA1P09884 1462 aaPredicted RBP36.39■■■■□ 3.42
SPHK1-208ENST00000591651 FGD5Q6ZNL6 1462 aa36.33■■■■□ 3.41
SPHK1-208ENST00000591651 WRNQ14191 1432 aaPredicted RBP eCLIP36.32■■■■□ 3.4
SPHK1-208ENST00000591651 SOGA1O94964 1423 aa36.25■■■■□ 3.39
SPHK1-208ENST00000591651 ZNF608Q9ULD9 1512 aaPredicted RBP36.24■■■■□ 3.39
SPHK1-208ENST00000591651 TARBP1Q13395 1621 aaKnown RBP36.23■■■■□ 3.39
SPHK1-208ENST00000591651 RAD54L2Q9Y4B4 1467 aa36.23■■■■□ 3.39
SPHK1-208ENST00000591651 TOP2BQ02880 1626 aa36.17■■■■□ 3.38
SPHK1-208ENST00000591651 SYNJ1O43426 1573 aa36.16■■■■□ 3.38
SPHK1-208ENST00000591651 BIVM-ERCC5R4GMW8 1640 aa36.14■■■■□ 3.38
SPHK1-208ENST00000591651 EIF4G3O43432 1585 aaKnown RBP36.08■■■■□ 3.37
SPHK1-208ENST00000591651 AQRO60306 1485 aaKnown RBP eCLIP36.06■■■■□ 3.362e-14■■■■■ 57.5
SPHK1-208ENST00000591651 TDRD9Q8NDG6 1382 aaKnown RBP36.03■■■■□ 3.36
SPHK1-208ENST00000591651 WDR97A6NE52 1622 aa36■■■■□ 3.35
SPHK1-208ENST00000591651 ABCA10Q8WWZ4 1543 aa35.99■■■■□ 3.35
SPHK1-208ENST00000591651 DNAJC5Q9H3Z4 198 aa35.88■■■■□ 3.33
SPHK1-208ENST00000591651 GAPVD1Q14C86 1478 aa35.84■■■■□ 3.33
SPHK1-208ENST00000591651 GRIN2BQ13224 1484 aa35.83■■■■□ 3.33
SPHK1-208ENST00000591651 ABCA5Q8WWZ7 1642 aa35.79■■■■□ 3.32
SPHK1-208ENST00000591651 SNAPC4Q5SXM2 1469 aa35.74■■■■□ 3.31
SPHK1-208ENST00000591651 MAGI1Q96QZ7 1491 aaPredicted RBP35.71■■■■□ 3.31
SPHK1-208ENST00000591651 OSCARQ8IYS5 282 aa35.7■■■■□ 3.31
SPHK1-208ENST00000591651 PBRM1Q86U86 1689 aa35.67■■■■□ 3.3
SPHK1-208ENST00000591651 FBLN2P98095 1184 aa35.63■■■■□ 3.29
SPHK1-208ENST00000591651 TRIM41Q8WV44 630 aa35.58■■■■□ 3.29
SPHK1-208ENST00000591651 SYNJ2O15056 1496 aa35.57■■■■□ 3.28
SPHK1-208ENST00000591651 CHMP7Q8WUX9 453 aaPredicted RBP35.57■■■■□ 3.28
SPHK1-208ENST00000591651 KIF27Q86VH2 1401 aa35.57■■■■□ 3.28
SPHK1-208ENST00000591651 ERICH3Q5RHP9 1530 aa35.56■■■■□ 3.28
SPHK1-208ENST00000591651 CHD1O14646 1710 aa35.54■■■■□ 3.28
SPHK1-208ENST00000591651 ADAMTS12P58397 1594 aa35.46■■■■□ 3.27
SPHK1-208ENST00000591651 FHAD1B1AJZ9 1412 aa35.45■■■■□ 3.27
SPHK1-208ENST00000591651 IGF1RP08069 1367 aa35.38■■■■□ 3.25
SPHK1-208ENST00000591651 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
SPHK1-208ENST00000591651 CUL7Q14999 1698 aa35.24■■■■□ 3.23
SPHK1-208ENST00000591651 CLASP1Q7Z460 1538 aa35.23■■■■□ 3.23
SPHK1-208ENST00000591651 CHIC1Q5VXU3 224 aa35.22■■■■□ 3.23
SPHK1-208ENST00000591651 RUSC2Q8N2Y8 1516 aa35.21■■■■□ 3.23
SPHK1-208ENST00000591651 NUP160Q12769 1436 aa35.2■■■■□ 3.23
SPHK1-208ENST00000591651 CARMIL1Q5VZK9 1371 aa35.18■■■■□ 3.22
SPHK1-208ENST00000591651 CEP170Q5SW79 1584 aa35.13■■■■□ 3.21
SPHK1-208ENST00000591651 ARHGEF11O15085 1522 aa35.1■■■■□ 3.21
SPHK1-208ENST00000591651 RIMBP3CA6NJZ7 1639 aa35.04■■■■□ 3.2
SPHK1-208ENST00000591651 RIMBP3BA6NNM3 1639 aa35.04■■■■□ 3.2
SPHK1-208ENST00000591651 RIMBP3Q9UFD9 1639 aa35.04■■■■□ 3.2
SPHK1-208ENST00000591651 EEA1Q15075 1411 aa34.98■■■■□ 3.19
SPHK1-208ENST00000591651 RAPGEF2Q9Y4G8 1499 aa34.98■■■■□ 3.19
SPHK1-208ENST00000591651 CSRNP3Q8WYN3 585 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms