Protein–RNA interactions for Protein: Q9Y5Q8

GTF3C5, General transcription factor 3C polypeptide 5, humanhuman

Predicted RBP Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5Q9Y5Q8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
GTF3C5Q9Y5Q8 KRT125P-201ENST00000546827 989 ntBASIC25.42■■□□□ 1.66
GTF3C5Q9Y5Q8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
GTF3C5Q9Y5Q8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
GTF3C5Q9Y5Q8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
GTF3C5Q9Y5Q8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
GTF3C5Q9Y5Q8 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.41■■□□□ 1.66
GTF3C5Q9Y5Q8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
GTF3C5Q9Y5Q8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GTF3C5Q9Y5Q8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
GTF3C5Q9Y5Q8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
GTF3C5Q9Y5Q8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
GTF3C5Q9Y5Q8 MIR4281-201ENST00000580852 62 ntBASIC25.4■■□□□ 1.66
GTF3C5Q9Y5Q8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.4■■□□□ 1.66
GTF3C5Q9Y5Q8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GTF3C5Q9Y5Q8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GTF3C5Q9Y5Q8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.39■■□□□ 1.66
GTF3C5Q9Y5Q8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GTF3C5Q9Y5Q8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GTF3C5Q9Y5Q8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
GTF3C5Q9Y5Q8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
GTF3C5Q9Y5Q8 GUSBP5-201ENST00000418136 578 ntBASIC25.39■■□□□ 1.66
GTF3C5Q9Y5Q8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
GTF3C5Q9Y5Q8 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.39■■□□□ 1.66
GTF3C5Q9Y5Q8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.38■■□□□ 1.65
GTF3C5Q9Y5Q8 AC145676.1-201ENST00000514988 2004 ntBASIC25.38■■□□□ 1.65
GTF3C5Q9Y5Q8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.38■■□□□ 1.65
GTF3C5Q9Y5Q8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.38■■□□□ 1.65
GTF3C5Q9Y5Q8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
GTF3C5Q9Y5Q8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
GTF3C5Q9Y5Q8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
GTF3C5Q9Y5Q8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
GTF3C5Q9Y5Q8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.37■■□□□ 1.65
GTF3C5Q9Y5Q8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
GTF3C5Q9Y5Q8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
GTF3C5Q9Y5Q8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
GTF3C5Q9Y5Q8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.36■■□□□ 1.65
GTF3C5Q9Y5Q8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
GTF3C5Q9Y5Q8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
GTF3C5Q9Y5Q8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.35■■□□□ 1.65
GTF3C5Q9Y5Q8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GTF3C5Q9Y5Q8 AC239859.2-201ENST00000444165 318 ntBASIC25.35■■□□□ 1.65
GTF3C5Q9Y5Q8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.35■■□□□ 1.65
GTF3C5Q9Y5Q8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
GTF3C5Q9Y5Q8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GTF3C5Q9Y5Q8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 AC021242.3-201ENST00000607598 1377 ntBASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 AC090877.2-201ENST00000558441 1738 ntBASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
GTF3C5Q9Y5Q8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.33■■□□□ 1.65
GTF3C5Q9Y5Q8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
GTF3C5Q9Y5Q8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
GTF3C5Q9Y5Q8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
GTF3C5Q9Y5Q8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
GTF3C5Q9Y5Q8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.32■■□□□ 1.64
GTF3C5Q9Y5Q8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.32■■□□□ 1.64
GTF3C5Q9Y5Q8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
GTF3C5Q9Y5Q8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
GTF3C5Q9Y5Q8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 MIR4787-201ENST00000607364 84 ntBASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 AC091060.1-201ENST00000623524 1766 ntBASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
GTF3C5Q9Y5Q8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.29■■□□□ 1.64
GTF3C5Q9Y5Q8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms