Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
NUCKS1Q9H1E3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NUCKS1Q9H1E3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NUCKS1Q9H1E3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.52■■□□□ 1.68
NUCKS1Q9H1E3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.52■■□□□ 1.68
NUCKS1Q9H1E3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 RP9P-202ENST00000450133 1212 ntBASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.51■■□□□ 1.67
NUCKS1Q9H1E3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NUCKS1Q9H1E3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
NUCKS1Q9H1E3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NUCKS1Q9H1E3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NUCKS1Q9H1E3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NUCKS1Q9H1E3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NUCKS1Q9H1E3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NUCKS1Q9H1E3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NUCKS1Q9H1E3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.49■■□□□ 1.67
NUCKS1Q9H1E3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
NUCKS1Q9H1E3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NUCKS1Q9H1E3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
NUCKS1Q9H1E3 MIR6089-201ENST00000616698 64 ntBASIC25.48■■□□□ 1.67
NUCKS1Q9H1E3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.48■■□□□ 1.67
NUCKS1Q9H1E3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NUCKS1Q9H1E3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NUCKS1Q9H1E3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NUCKS1Q9H1E3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NUCKS1Q9H1E3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NUCKS1Q9H1E3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NUCKS1Q9H1E3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.46■■□□□ 1.67
NUCKS1Q9H1E3 AC007029.1-201ENST00000604183 313 ntBASIC25.46■■□□□ 1.67
NUCKS1Q9H1E3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
NUCKS1Q9H1E3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.46■■□□□ 1.67
NUCKS1Q9H1E3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NUCKS1Q9H1E3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
NUCKS1Q9H1E3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
NUCKS1Q9H1E3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.45■■□□□ 1.66
NUCKS1Q9H1E3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.45■■□□□ 1.66
NUCKS1Q9H1E3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NUCKS1Q9H1E3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
NUCKS1Q9H1E3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
NUCKS1Q9H1E3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
NUCKS1Q9H1E3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NUCKS1Q9H1E3 KRT18P10-201ENST00000388836 1287 ntBASIC25.43■■□□□ 1.66
NUCKS1Q9H1E3 AC093536.1-201ENST00000569153 554 ntBASIC25.43■■□□□ 1.66
NUCKS1Q9H1E3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
NUCKS1Q9H1E3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
NUCKS1Q9H1E3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NUCKS1Q9H1E3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
NUCKS1Q9H1E3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
NUCKS1Q9H1E3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NUCKS1Q9H1E3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
NUCKS1Q9H1E3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
NUCKS1Q9H1E3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.42■■□□□ 1.66
NUCKS1Q9H1E3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
NUCKS1Q9H1E3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NUCKS1Q9H1E3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.42■■□□□ 1.66
NUCKS1Q9H1E3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.41■■□□□ 1.66
NUCKS1Q9H1E3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.41■■□□□ 1.66
NUCKS1Q9H1E3 U85056.1-201ENST00000616429 682 ntBASIC25.41■■□□□ 1.66
NUCKS1Q9H1E3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
NUCKS1Q9H1E3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
NUCKS1Q9H1E3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.41■■□□□ 1.66
NUCKS1Q9H1E3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.41■■□□□ 1.66
NUCKS1Q9H1E3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.41■■□□□ 1.66
NUCKS1Q9H1E3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
NUCKS1Q9H1E3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
NUCKS1Q9H1E3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
NUCKS1Q9H1E3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NUCKS1Q9H1E3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NUCKS1Q9H1E3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
NUCKS1Q9H1E3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NUCKS1Q9H1E3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
NUCKS1Q9H1E3 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.39■■□□□ 1.66
NUCKS1Q9H1E3 NTF6A-201ENST00000591175 560 ntBASIC25.39■■□□□ 1.66
NUCKS1Q9H1E3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NUCKS1Q9H1E3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NUCKS1Q9H1E3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NUCKS1Q9H1E3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.39■■□□□ 1.65
NUCKS1Q9H1E3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NUCKS1Q9H1E3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
NUCKS1Q9H1E3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NUCKS1Q9H1E3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.39■■□□□ 1.65
NUCKS1Q9H1E3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms