Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
LRRC3BQ96PB8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRRC3BQ96PB8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRRC3BQ96PB8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRRC3BQ96PB8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LRRC3BQ96PB8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.47■■□□□ 1.51
LRRC3BQ96PB8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.47■■□□□ 1.51
LRRC3BQ96PB8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRRC3BQ96PB8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRRC3BQ96PB8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.47■■□□□ 1.51
LRRC3BQ96PB8 AC010997.5-201ENST00000609182 354 ntBASIC24.47■■□□□ 1.51
LRRC3BQ96PB8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.46■■□□□ 1.51
LRRC3BQ96PB8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.46■■□□□ 1.51
LRRC3BQ96PB8 AF131216.4-201ENST00000638924 1588 ntBASIC24.46■■□□□ 1.51
LRRC3BQ96PB8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
LRRC3BQ96PB8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 AL117332.1-201ENST00000622628 974 ntBASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.45■■□□□ 1.5
LRRC3BQ96PB8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.44■■□□□ 1.5
LRRC3BQ96PB8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.44■■□□□ 1.5
LRRC3BQ96PB8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LRRC3BQ96PB8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LRRC3BQ96PB8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.44■■□□□ 1.5
LRRC3BQ96PB8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.44■■□□□ 1.5
LRRC3BQ96PB8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
LRRC3BQ96PB8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
LRRC3BQ96PB8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.43■■□□□ 1.5
LRRC3BQ96PB8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRC3BQ96PB8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRC3BQ96PB8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRC3BQ96PB8 FOXO3B-201ENST00000395675 1928 ntBASIC24.42■■□□□ 1.5
LRRC3BQ96PB8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
LRRC3BQ96PB8 MIR638-201ENST00000385237 100 ntBASIC24.42■■□□□ 1.5
LRRC3BQ96PB8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LRRC3BQ96PB8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.42■■□□□ 1.5
LRRC3BQ96PB8 MIR3621-201ENST00000580529 85 ntBASIC24.42■■□□□ 1.5
LRRC3BQ96PB8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRRC3BQ96PB8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRRC3BQ96PB8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC3BQ96PB8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC3BQ96PB8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.41■■□□□ 1.5
LRRC3BQ96PB8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC3BQ96PB8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 MIR6724-1-201ENST00000616420 92 ntBASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 MIR6724-2-201ENST00000616483 92 ntBASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 MIR6724-4-201ENST00000617390 92 ntBASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 MIR6724-3-201ENST00000622482 92 ntBASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.4■■□□□ 1.5
LRRC3BQ96PB8 ERN1-208ENST00000606895 2068 ntBASIC24.39■■□□□ 1.5
LRRC3BQ96PB8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LRRC3BQ96PB8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
LRRC3BQ96PB8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.39■■□□□ 1.49
LRRC3BQ96PB8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LRRC3BQ96PB8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.39■■□□□ 1.49
LRRC3BQ96PB8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.39■■□□□ 1.49
LRRC3BQ96PB8 MTDHP2-201ENST00000601468 714 ntBASIC24.39■■□□□ 1.49
LRRC3BQ96PB8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.39■■□□□ 1.49
LRRC3BQ96PB8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
LRRC3BQ96PB8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.38■■□□□ 1.49
LRRC3BQ96PB8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRRC3BQ96PB8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRRC3BQ96PB8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LRRC3BQ96PB8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRRC3BQ96PB8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.38■■□□□ 1.49
LRRC3BQ96PB8 AC096887.2-201ENST00000623443 1957 ntBASIC24.38■■□□□ 1.49
LRRC3BQ96PB8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 AL136116.3-201ENST00000402907 1138 ntBASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 MIR4466-201ENST00000606121 54 ntBASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC3BQ96PB8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LRRC3BQ96PB8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.36■■□□□ 1.49
LRRC3BQ96PB8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRRC3BQ96PB8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
LRRC3BQ96PB8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRRC3BQ96PB8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
LRRC3BQ96PB8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.36■■□□□ 1.49
LRRC3BQ96PB8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms