Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX1Q92499 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX1Q92499 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX1Q92499 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
DDX1Q92499 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX1Q92499 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX1Q92499 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX1Q92499 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX1Q92499 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX1Q92499 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.21■■□□□ 1.63
DDX1Q92499 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX1Q92499 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.21■■□□□ 1.63
DDX1Q92499 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX1Q92499 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX1Q92499 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
DDX1Q92499 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX1Q92499 AL139125.2-201ENST00000623134 1869 ntBASIC25.2■■□□□ 1.62
DDX1Q92499 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX1Q92499 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX1Q92499 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
DDX1Q92499 KRT18P10-201ENST00000388836 1287 ntBASIC25.2■■□□□ 1.62
DDX1Q92499 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX1Q92499 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
DDX1Q92499 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.2■■□□□ 1.62
DDX1Q92499 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DDX1Q92499 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DDX1Q92499 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.19■■□□□ 1.62
DDX1Q92499 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX1Q92499 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DDX1Q92499 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX1Q92499 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
DDX1Q92499 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.18■■□□□ 1.62
DDX1Q92499 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.18■■□□□ 1.62
DDX1Q92499 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
DDX1Q92499 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX1Q92499 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX1Q92499 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.17■■□□□ 1.62
DDX1Q92499 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.17■■□□□ 1.62
DDX1Q92499 AP003733.4-201ENST00000623785 1697 ntBASIC25.17■■□□□ 1.62
DDX1Q92499 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX1Q92499 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
DDX1Q92499 DUX4L9-201ENST00000449051 1259 ntBASIC25.16■■□□□ 1.62
DDX1Q92499 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
DDX1Q92499 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.16■■□□□ 1.62
DDX1Q92499 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX1Q92499 AC093323.1-202ENST00000635031 2045 ntBASIC25.15■■□□□ 1.62
DDX1Q92499 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX1Q92499 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX1Q92499 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.15■■□□□ 1.62
DDX1Q92499 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX1Q92499 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.15■■□□□ 1.62
DDX1Q92499 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DDX1Q92499 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX1Q92499 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX1Q92499 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX1Q92499 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX1Q92499 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX1Q92499 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.14■■□□□ 1.62
DDX1Q92499 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX1Q92499 AL451085.2-201ENST00000605085 799 ntBASIC25.14■■□□□ 1.62
DDX1Q92499 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.14■■□□□ 1.61
DDX1Q92499 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.14■■□□□ 1.61
DDX1Q92499 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX1Q92499 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX1Q92499 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX1Q92499 RPS2P7-201ENST00000447334 885 ntBASIC25.13■■□□□ 1.61
DDX1Q92499 AC018755.3-202ENST00000596210 929 ntBASIC25.13■■□□□ 1.61
DDX1Q92499 AC129492.7-201ENST00000622992 756 ntBASIC25.13■■□□□ 1.61
DDX1Q92499 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX1Q92499 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
DDX1Q92499 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
DDX1Q92499 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.12■■□□□ 1.61
DDX1Q92499 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX1Q92499 MIR6089-201ENST00000616698 64 ntBASIC25.12■■□□□ 1.61
DDX1Q92499 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
DDX1Q92499 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.12■■□□□ 1.61
DDX1Q92499 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX1Q92499 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.12■■□□□ 1.61
DDX1Q92499 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX1Q92499 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX1Q92499 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX1Q92499 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.11■■□□□ 1.61
DDX1Q92499 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX1Q92499 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX1Q92499 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
DDX1Q92499 FOXO3B-201ENST00000395675 1928 ntBASIC25.11■■□□□ 1.61
DDX1Q92499 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
DDX1Q92499 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
DDX1Q92499 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
DDX1Q92499 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX1Q92499 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX1Q92499 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX1Q92499 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX1Q92499 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX1Q92499 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX1Q92499 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX1Q92499 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX1Q92499 AC087393.1-201ENST00000582896 145 ntBASIC25.09■■□□□ 1.61
DDX1Q92499 MIR6765-201ENST00000614092 87 ntBASIC25.09■■□□□ 1.61
DDX1Q92499 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms