Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.89■■□□□ 1.41
PTCD2Q8WV60 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD2Q8WV60 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
PTCD2Q8WV60 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.89■■□□□ 1.41
PTCD2Q8WV60 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.88■■□□□ 1.41
PTCD2Q8WV60 AC018755.3-202ENST00000596210 929 ntBASIC23.88■■□□□ 1.41
PTCD2Q8WV60 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.88■■□□□ 1.41
PTCD2Q8WV60 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
PTCD2Q8WV60 AP003733.4-201ENST00000623785 1697 ntBASIC23.88■■□□□ 1.41
PTCD2Q8WV60 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD2Q8WV60 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD2Q8WV60 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PTCD2Q8WV60 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD2Q8WV60 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD2Q8WV60 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PTCD2Q8WV60 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PTCD2Q8WV60 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PTCD2Q8WV60 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD2Q8WV60 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD2Q8WV60 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD2Q8WV60 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD2Q8WV60 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PTCD2Q8WV60 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.87■■□□□ 1.41
PTCD2Q8WV60 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PTCD2Q8WV60 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD2Q8WV60 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD2Q8WV60 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD2Q8WV60 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD2Q8WV60 AC010980.1-201ENST00000587192 1142 ntBASIC23.86■■□□□ 1.41
PTCD2Q8WV60 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD2Q8WV60 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PTCD2Q8WV60 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCD2Q8WV60 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD2Q8WV60 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD2Q8WV60 RARRES2P1-201ENST00000474487 481 ntBASIC23.85■■□□□ 1.41
PTCD2Q8WV60 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD2Q8WV60 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD2Q8WV60 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD2Q8WV60 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD2Q8WV60 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PTCD2Q8WV60 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD2Q8WV60 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD2Q8WV60 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD2Q8WV60 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.84■■□□□ 1.41
PTCD2Q8WV60 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD2Q8WV60 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD2Q8WV60 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD2Q8WV60 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD2Q8WV60 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.83■■□□□ 1.41
PTCD2Q8WV60 PVT1_1.1-201ENST00000615125 194 ntBASIC23.83■■□□□ 1.41
PTCD2Q8WV60 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD2Q8WV60 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PTCD2Q8WV60 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD2Q8WV60 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD2Q8WV60 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.82■■□□□ 1.4
PTCD2Q8WV60 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
PTCD2Q8WV60 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
PTCD2Q8WV60 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.81■■□□□ 1.4
PTCD2Q8WV60 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD2Q8WV60 BHLHE23-202ENST00000612929 1109 ntBASIC23.81■■□□□ 1.4
PTCD2Q8WV60 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD2Q8WV60 AL139125.2-201ENST00000623134 1869 ntBASIC23.81■■□□□ 1.4
PTCD2Q8WV60 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD2Q8WV60 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.8■■□□□ 1.4
PTCD2Q8WV60 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD2Q8WV60 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PTCD2Q8WV60 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PTCD2Q8WV60 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.8■■□□□ 1.4
PTCD2Q8WV60 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.8■■□□□ 1.4
PTCD2Q8WV60 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD2Q8WV60 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD2Q8WV60 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD2Q8WV60 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
PTCD2Q8WV60 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.79■■□□□ 1.4
PTCD2Q8WV60 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.79■■□□□ 1.4
PTCD2Q8WV60 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD2Q8WV60 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD2Q8WV60 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.78■■□□□ 1.4
PTCD2Q8WV60 AC139795.1-202ENST00000500444 432 ntBASIC23.78■■□□□ 1.4
PTCD2Q8WV60 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCD2Q8WV60 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCD2Q8WV60 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD2Q8WV60 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD2Q8WV60 AC093323.1-202ENST00000635031 2045 ntBASIC23.77■■□□□ 1.4
PTCD2Q8WV60 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD2Q8WV60 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD2Q8WV60 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD2Q8WV60 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.77■■□□□ 1.4
PTCD2Q8WV60 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD2Q8WV60 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.77■■□□□ 1.4
PTCD2Q8WV60 MIR6089-201ENST00000616698 64 ntBASIC23.77■■□□□ 1.4
PTCD2Q8WV60 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD2Q8WV60 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD2Q8WV60 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD2Q8WV60 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.76■■□□□ 1.39
PTCD2Q8WV60 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD2Q8WV60 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD2Q8WV60 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.76■■□□□ 1.39
PTCD2Q8WV60 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD2Q8WV60 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms