Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 GAK-223ENST00000628912 497 ntTSL 5 BASIC33.29■■■□□ 2.92
ARHGEF28Q8N1W1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
ARHGEF28Q8N1W1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC33.29■■■□□ 2.92
ARHGEF28Q8N1W1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
ARHGEF28Q8N1W1 ERN1-208ENST00000606895 2068 ntBASIC33.29■■■□□ 2.92
ARHGEF28Q8N1W1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
ARHGEF28Q8N1W1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC33.28■■■□□ 2.92
ARHGEF28Q8N1W1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC33.28■■■□□ 2.92
ARHGEF28Q8N1W1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
ARHGEF28Q8N1W1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
ARHGEF28Q8N1W1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC33.28■■■□□ 2.92
ARHGEF28Q8N1W1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
ARHGEF28Q8N1W1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ARHGEF28Q8N1W1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ARHGEF28Q8N1W1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC33.27■■■□□ 2.92
ARHGEF28Q8N1W1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC33.26■■■□□ 2.92
ARHGEF28Q8N1W1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
ARHGEF28Q8N1W1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
ARHGEF28Q8N1W1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
ARHGEF28Q8N1W1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
ARHGEF28Q8N1W1 AL117332.1-201ENST00000622628 974 ntBASIC33.25■■■□□ 2.91
ARHGEF28Q8N1W1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC33.25■■■□□ 2.91
ARHGEF28Q8N1W1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC33.25■■■□□ 2.91
ARHGEF28Q8N1W1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC33.24■■■□□ 2.91
ARHGEF28Q8N1W1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC33.24■■■□□ 2.91
ARHGEF28Q8N1W1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
ARHGEF28Q8N1W1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
ARHGEF28Q8N1W1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
ARHGEF28Q8N1W1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
ARHGEF28Q8N1W1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
ARHGEF28Q8N1W1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
ARHGEF28Q8N1W1 FOXO3B-201ENST00000395675 1928 ntBASIC33.23■■■□□ 2.91
ARHGEF28Q8N1W1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC33.22■■■□□ 2.91
ARHGEF28Q8N1W1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
ARHGEF28Q8N1W1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC33.22■■■□□ 2.91
ARHGEF28Q8N1W1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
ARHGEF28Q8N1W1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
ARHGEF28Q8N1W1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC33.21■■■□□ 2.91
ARHGEF28Q8N1W1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
ARHGEF28Q8N1W1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC33.2■■■□□ 2.91
ARHGEF28Q8N1W1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC33.2■■■□□ 2.91
ARHGEF28Q8N1W1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC33.2■■■□□ 2.91
ARHGEF28Q8N1W1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.91
ARHGEF28Q8N1W1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
ARHGEF28Q8N1W1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC33.2■■■□□ 2.9
ARHGEF28Q8N1W1 MTDHP2-201ENST00000601468 714 ntBASIC33.19■■■□□ 2.9
ARHGEF28Q8N1W1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
ARHGEF28Q8N1W1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC33.19■■■□□ 2.9
ARHGEF28Q8N1W1 AC010501.1-201ENST00000606270 1962 ntBASIC33.19■■■□□ 2.9
ARHGEF28Q8N1W1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ARHGEF28Q8N1W1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ARHGEF28Q8N1W1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ARHGEF28Q8N1W1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF28Q8N1W1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF28Q8N1W1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC33.17■■■□□ 2.9
ARHGEF28Q8N1W1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF28Q8N1W1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF28Q8N1W1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
ARHGEF28Q8N1W1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC33.16■■■□□ 2.9
ARHGEF28Q8N1W1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
ARHGEF28Q8N1W1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
ARHGEF28Q8N1W1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC33.15■■■□□ 2.9
ARHGEF28Q8N1W1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC33.15■■■□□ 2.9
ARHGEF28Q8N1W1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
ARHGEF28Q8N1W1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
ARHGEF28Q8N1W1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
ARHGEF28Q8N1W1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
ARHGEF28Q8N1W1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC33.14■■■□□ 2.9
ARHGEF28Q8N1W1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC33.14■■■□□ 2.9
ARHGEF28Q8N1W1 AL512631.2-201ENST00000604634 923 ntBASIC33.14■■■□□ 2.9
ARHGEF28Q8N1W1 SNX5-217ENST00000606557 1087 ntBASIC33.14■■■□□ 2.9
ARHGEF28Q8N1W1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
ARHGEF28Q8N1W1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC33.14■■■□□ 2.9
ARHGEF28Q8N1W1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC33.14■■■□□ 2.9
ARHGEF28Q8N1W1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC33.14■■■□□ 2.89
ARHGEF28Q8N1W1 MIR6724-1-201ENST00000616420 92 ntBASIC33.14■■■□□ 2.89
ARHGEF28Q8N1W1 MIR6724-2-201ENST00000616483 92 ntBASIC33.14■■■□□ 2.89
ARHGEF28Q8N1W1 MIR6724-4-201ENST00000617390 92 ntBASIC33.14■■■□□ 2.89
ARHGEF28Q8N1W1 MIR6724-3-201ENST00000622482 92 ntBASIC33.14■■■□□ 2.89
ARHGEF28Q8N1W1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
ARHGEF28Q8N1W1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
ARHGEF28Q8N1W1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC33.13■■■□□ 2.89
ARHGEF28Q8N1W1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
ARHGEF28Q8N1W1 AC008406.3-201ENST00000620001 1374 ntBASIC33.12■■■□□ 2.89
ARHGEF28Q8N1W1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC33.12■■■□□ 2.89
ARHGEF28Q8N1W1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC33.11■■■□□ 2.89
ARHGEF28Q8N1W1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC33.11■■■□□ 2.89
ARHGEF28Q8N1W1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
ARHGEF28Q8N1W1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
ARHGEF28Q8N1W1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
ARHGEF28Q8N1W1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
ARHGEF28Q8N1W1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
ARHGEF28Q8N1W1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC33.1■■■□□ 2.89
ARHGEF28Q8N1W1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ARHGEF28Q8N1W1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC33.1■■■□□ 2.89
ARHGEF28Q8N1W1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
ARHGEF28Q8N1W1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ARHGEF28Q8N1W1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC33.1■■■□□ 2.89
ARHGEF28Q8N1W1 AC097639.1-201ENST00000565519 1891 ntBASIC33.09■■■□□ 2.89
ARHGEF28Q8N1W1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC33.09■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms