Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC33.5■■■□□ 2.95
XRN1Q8IZH2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
XRN1Q8IZH2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC33.49■■■□□ 2.95
XRN1Q8IZH2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC33.49■■■□□ 2.95
XRN1Q8IZH2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
XRN1Q8IZH2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC33.48■■■□□ 2.95
XRN1Q8IZH2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC33.48■■■□□ 2.95
XRN1Q8IZH2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC33.48■■■□□ 2.95
XRN1Q8IZH2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
XRN1Q8IZH2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
XRN1Q8IZH2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC33.48■■■□□ 2.95
XRN1Q8IZH2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC33.48■■■□□ 2.95
XRN1Q8IZH2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
XRN1Q8IZH2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC33.47■■■□□ 2.95
XRN1Q8IZH2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC33.47■■■□□ 2.95
XRN1Q8IZH2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC33.46■■■□□ 2.95
XRN1Q8IZH2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC33.46■■■□□ 2.95
XRN1Q8IZH2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC33.46■■■□□ 2.95
XRN1Q8IZH2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC33.46■■■□□ 2.95
XRN1Q8IZH2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC33.45■■■□□ 2.95
XRN1Q8IZH2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC33.45■■■□□ 2.95
XRN1Q8IZH2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
XRN1Q8IZH2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC33.45■■■□□ 2.95
XRN1Q8IZH2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
XRN1Q8IZH2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC33.44■■■□□ 2.94
XRN1Q8IZH2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC33.44■■■□□ 2.94
XRN1Q8IZH2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC33.44■■■□□ 2.94
XRN1Q8IZH2 AC135279.3-201ENST00000610945 1311 ntBASIC33.44■■■□□ 2.94
XRN1Q8IZH2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
XRN1Q8IZH2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
XRN1Q8IZH2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC33.43■■■□□ 2.94
XRN1Q8IZH2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC33.43■■■□□ 2.94
XRN1Q8IZH2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC33.42■■■□□ 2.94
XRN1Q8IZH2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC33.42■■■□□ 2.94
XRN1Q8IZH2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC33.42■■■□□ 2.94
XRN1Q8IZH2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
XRN1Q8IZH2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC33.42■■■□□ 2.94
XRN1Q8IZH2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC33.42■■■□□ 2.94
XRN1Q8IZH2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC33.42■■■□□ 2.94
XRN1Q8IZH2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC33.42■■■□□ 2.94
XRN1Q8IZH2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
XRN1Q8IZH2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
XRN1Q8IZH2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC33.41■■■□□ 2.94
XRN1Q8IZH2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
XRN1Q8IZH2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC33.41■■■□□ 2.94
XRN1Q8IZH2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
XRN1Q8IZH2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC33.39■■■□□ 2.94
XRN1Q8IZH2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC33.39■■■□□ 2.94
XRN1Q8IZH2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
XRN1Q8IZH2 AC142381.2-201ENST00000566120 298 ntBASIC33.38■■■□□ 2.93
XRN1Q8IZH2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC33.38■■■□□ 2.93
XRN1Q8IZH2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
XRN1Q8IZH2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC33.37■■■□□ 2.93
XRN1Q8IZH2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
XRN1Q8IZH2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
XRN1Q8IZH2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
XRN1Q8IZH2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
XRN1Q8IZH2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC33.37■■■□□ 2.93
XRN1Q8IZH2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC33.36■■■□□ 2.93
XRN1Q8IZH2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC33.36■■■□□ 2.93
XRN1Q8IZH2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC33.36■■■□□ 2.93
XRN1Q8IZH2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC33.36■■■□□ 2.93
XRN1Q8IZH2 AC104564.3-201ENST00000582367 638 ntBASIC33.36■■■□□ 2.93
XRN1Q8IZH2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
XRN1Q8IZH2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
XRN1Q8IZH2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
XRN1Q8IZH2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC33.35■■■□□ 2.93
XRN1Q8IZH2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC33.35■■■□□ 2.93
XRN1Q8IZH2 AP004609.3-201ENST00000610705 1884 ntBASIC33.35■■■□□ 2.93
XRN1Q8IZH2 PBX2P1-201ENST00000493219 1291 ntBASIC33.33■■■□□ 2.93
XRN1Q8IZH2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
XRN1Q8IZH2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
XRN1Q8IZH2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
XRN1Q8IZH2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC33.32■■■□□ 2.92
XRN1Q8IZH2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
XRN1Q8IZH2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC33.32■■■□□ 2.92
XRN1Q8IZH2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC33.32■■■□□ 2.92
XRN1Q8IZH2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC33.31■■■□□ 2.92
XRN1Q8IZH2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC33.3■■■□□ 2.92
XRN1Q8IZH2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC33.3■■■□□ 2.92
XRN1Q8IZH2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC33.3■■■□□ 2.92
XRN1Q8IZH2 AC092666.2-201ENST00000613287 246 ntBASIC33.3■■■□□ 2.92
XRN1Q8IZH2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC33.29■■■□□ 2.92
XRN1Q8IZH2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC33.29■■■□□ 2.92
XRN1Q8IZH2 AL136162.1-201ENST00000607711 1078 ntBASIC33.29■■■□□ 2.92
XRN1Q8IZH2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC33.28■■■□□ 2.92
XRN1Q8IZH2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
XRN1Q8IZH2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
XRN1Q8IZH2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC33.28■■■□□ 2.92
XRN1Q8IZH2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
XRN1Q8IZH2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC33.28■■■□□ 2.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms