Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC30Q5VVM6 THA1P-201ENST00000590384 1145 ntBASIC30.3■■■□□ 2.44
CCDC30Q5VVM6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC30Q5VVM6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.29■■■□□ 2.44
CCDC30Q5VVM6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC30Q5VVM6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
CCDC30Q5VVM6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC30Q5VVM6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
CCDC30Q5VVM6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC30Q5VVM6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC30Q5VVM6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
CCDC30Q5VVM6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC30Q5VVM6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC30Q5VVM6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CCDC30Q5VVM6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC30Q5VVM6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC30Q5VVM6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.27■■■□□ 2.44
CCDC30Q5VVM6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC30Q5VVM6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.26■■■□□ 2.43
CCDC30Q5VVM6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC30Q5VVM6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC30Q5VVM6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC30Q5VVM6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC30Q5VVM6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.25■■■□□ 2.43
CCDC30Q5VVM6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC30Q5VVM6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC30Q5VVM6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC30Q5VVM6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.25■■■□□ 2.43
CCDC30Q5VVM6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
CCDC30Q5VVM6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC30Q5VVM6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC30Q5VVM6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC30Q5VVM6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC30Q5VVM6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC30Q5VVM6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.23■■■□□ 2.43
CCDC30Q5VVM6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC30Q5VVM6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.23■■■□□ 2.43
CCDC30Q5VVM6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC30Q5VVM6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.23■■■□□ 2.43
CCDC30Q5VVM6 AC011551.1-201ENST00000614101 683 ntBASIC30.23■■■□□ 2.43
CCDC30Q5VVM6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC30Q5VVM6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC30Q5VVM6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC30Q5VVM6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC30Q5VVM6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.22■■■□□ 2.43
CCDC30Q5VVM6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.22■■■□□ 2.43
CCDC30Q5VVM6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC30Q5VVM6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC30Q5VVM6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
CCDC30Q5VVM6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CCDC30Q5VVM6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CCDC30Q5VVM6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.21■■■□□ 2.43
CCDC30Q5VVM6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.21■■■□□ 2.43
CCDC30Q5VVM6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.2■■■□□ 2.43
CCDC30Q5VVM6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC30Q5VVM6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC30Q5VVM6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CCDC30Q5VVM6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CCDC30Q5VVM6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.19■■■□□ 2.42
CCDC30Q5VVM6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC30Q5VVM6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC30Q5VVM6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.18■■■□□ 2.42
CCDC30Q5VVM6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.18■■■□□ 2.42
CCDC30Q5VVM6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.18■■■□□ 2.42
CCDC30Q5VVM6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC30Q5VVM6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC30Q5VVM6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC30Q5VVM6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC30Q5VVM6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.17■■■□□ 2.42
CCDC30Q5VVM6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
CCDC30Q5VVM6 MIR4281-201ENST00000580852 62 ntBASIC30.17■■■□□ 2.42
CCDC30Q5VVM6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.17■■■□□ 2.42
CCDC30Q5VVM6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.17■■■□□ 2.42
CCDC30Q5VVM6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.17■■■□□ 2.42
CCDC30Q5VVM6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.16■■■□□ 2.42
CCDC30Q5VVM6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CCDC30Q5VVM6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC30Q5VVM6 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.16■■■□□ 2.42
CCDC30Q5VVM6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.16■■■□□ 2.42
CCDC30Q5VVM6 SLC6A10P-202ENST00000431994 2058 ntBASIC30.16■■■□□ 2.42
CCDC30Q5VVM6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.15■■■□□ 2.42
CCDC30Q5VVM6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC30Q5VVM6 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.15■■■□□ 2.42
CCDC30Q5VVM6 Z92544.1-202ENST00000571933 1220 ntBASIC30.15■■■□□ 2.42
CCDC30Q5VVM6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.15■■■□□ 2.42
CCDC30Q5VVM6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC30Q5VVM6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC30Q5VVM6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC30Q5VVM6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.13■■■□□ 2.41
CCDC30Q5VVM6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC30Q5VVM6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC30Q5VVM6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CCDC30Q5VVM6 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.13■■■□□ 2.41
CCDC30Q5VVM6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC30Q5VVM6 AC137630.3-201ENST00000607245 391 ntBASIC30.13■■■□□ 2.41
CCDC30Q5VVM6 AC090877.2-201ENST00000558441 1738 ntBASIC30.13■■■□□ 2.41
CCDC30Q5VVM6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
CCDC30Q5VVM6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC30Q5VVM6 AC239859.2-201ENST00000444165 318 ntBASIC30.12■■■□□ 2.41
CCDC30Q5VVM6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms