Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LTN1O94822 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
LTN1O94822 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC31.93■■■□□ 2.7
LTN1O94822 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
LTN1O94822 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.92■■■□□ 2.7
LTN1O94822 AC010997.5-201ENST00000609182 354 ntBASIC31.92■■■□□ 2.7
LTN1O94822 AC110285.6-201ENST00000617652 491 ntBASIC31.92■■■□□ 2.7
LTN1O94822 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
LTN1O94822 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LTN1O94822 EXOG-217ENST00000630638 197 ntTSL 5 BASIC31.91■■■□□ 2.7
LTN1O94822 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.91■■■□□ 2.7
LTN1O94822 AL136116.3-201ENST00000402907 1138 ntBASIC31.91■■■□□ 2.7
LTN1O94822 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
LTN1O94822 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.9■■■□□ 2.7
LTN1O94822 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
LTN1O94822 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.9■■■□□ 2.7
LTN1O94822 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
LTN1O94822 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
LTN1O94822 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.89■■■□□ 2.7
LTN1O94822 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.89■■■□□ 2.69
LTN1O94822 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.89■■■□□ 2.69
LTN1O94822 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
LTN1O94822 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
LTN1O94822 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
LTN1O94822 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
LTN1O94822 MIR3621-201ENST00000580529 85 ntBASIC31.88■■■□□ 2.69
LTN1O94822 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
LTN1O94822 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
LTN1O94822 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
LTN1O94822 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LTN1O94822 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LTN1O94822 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LTN1O94822 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.86■■■□□ 2.69
LTN1O94822 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LTN1O94822 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
LTN1O94822 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
LTN1O94822 SNX5-217ENST00000606557 1087 ntBASIC31.86■■■□□ 2.69
LTN1O94822 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.85■■■□□ 2.69
LTN1O94822 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LTN1O94822 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.85■■■□□ 2.69
LTN1O94822 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC31.85■■■□□ 2.69
LTN1O94822 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.85■■■□□ 2.69
LTN1O94822 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.85■■■□□ 2.69
LTN1O94822 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
LTN1O94822 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
LTN1O94822 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.84■■■□□ 2.69
LTN1O94822 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.84■■■□□ 2.69
LTN1O94822 MIR935-201ENST00000401179 91 ntBASIC31.84■■■□□ 2.69
LTN1O94822 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.84■■■□□ 2.69
LTN1O94822 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
LTN1O94822 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
LTN1O94822 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
LTN1O94822 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
LTN1O94822 RASSF1-AS1-201ENST00000629828 790 ntBASIC31.83■■■□□ 2.69
LTN1O94822 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
LTN1O94822 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
LTN1O94822 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.82■■■□□ 2.68
LTN1O94822 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.81■■■□□ 2.68
LTN1O94822 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.81■■■□□ 2.68
LTN1O94822 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
LTN1O94822 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
LTN1O94822 AC096887.2-201ENST00000623443 1957 ntBASIC31.81■■■□□ 2.68
LTN1O94822 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.81■■■□□ 2.68
LTN1O94822 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
LTN1O94822 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.8■■■□□ 2.68
LTN1O94822 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
LTN1O94822 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
LTN1O94822 CD72-202ENST00000378430 585 ntTSL 3 BASIC31.79■■■□□ 2.68
LTN1O94822 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
LTN1O94822 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.79■■■□□ 2.68
LTN1O94822 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
LTN1O94822 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
LTN1O94822 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
LTN1O94822 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.79■■■□□ 2.68
LTN1O94822 AL139246.5-201ENST00000606645 996 ntBASIC31.79■■■□□ 2.68
LTN1O94822 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC31.79■■■□□ 2.68
LTN1O94822 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.78■■■□□ 2.68
LTN1O94822 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LTN1O94822 FOXO3B-201ENST00000395675 1928 ntBASIC31.77■■■□□ 2.68
LTN1O94822 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.77■■■□□ 2.68
LTN1O94822 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC31.77■■■□□ 2.68
LTN1O94822 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.77■■■□□ 2.68
LTN1O94822 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
LTN1O94822 TFPT-201ENST00000391757 774 ntTSL 5 BASIC31.76■■■□□ 2.68
LTN1O94822 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
LTN1O94822 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.76■■■□□ 2.67
LTN1O94822 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.76■■■□□ 2.67
LTN1O94822 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
LTN1O94822 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTN1O94822 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTN1O94822 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTN1O94822 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTN1O94822 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC31.75■■■□□ 2.67
LTN1O94822 CLTA-210ENST00000540080 989 ntTSL 2 BASIC31.75■■■□□ 2.67
LTN1O94822 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTN1O94822 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTN1O94822 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.75■■■□□ 2.67
LTN1O94822 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTN1O94822 AK3-203ENST00000447596 705 ntTSL 2 BASIC31.74■■■□□ 2.67
LTN1O94822 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms