Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.19■■□□□ 1.46
SHISA7A6NL88 ZNRF2P3-201ENST00000424200 374 ntBASIC24.18■■□□□ 1.46
SHISA7A6NL88 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.18■■□□□ 1.46
SHISA7A6NL88 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.18■■□□□ 1.46
SHISA7A6NL88 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHISA7A6NL88 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SHISA7A6NL88 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHISA7A6NL88 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SHISA7A6NL88 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.17■■□□□ 1.46
SHISA7A6NL88 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.17■■□□□ 1.46
SHISA7A6NL88 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHISA7A6NL88 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHISA7A6NL88 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.17■■□□□ 1.46
SHISA7A6NL88 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SHISA7A6NL88 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHISA7A6NL88 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.16■■□□□ 1.46
SHISA7A6NL88 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.16■■□□□ 1.46
SHISA7A6NL88 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SHISA7A6NL88 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.16■■□□□ 1.46
SHISA7A6NL88 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SHISA7A6NL88 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHISA7A6NL88 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHISA7A6NL88 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SHISA7A6NL88 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHISA7A6NL88 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.15■■□□□ 1.46
SHISA7A6NL88 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.15■■□□□ 1.46
SHISA7A6NL88 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.15■■□□□ 1.46
SHISA7A6NL88 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHISA7A6NL88 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SHISA7A6NL88 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.14■■□□□ 1.45
SHISA7A6NL88 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.14■■□□□ 1.45
SHISA7A6NL88 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SHISA7A6NL88 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SHISA7A6NL88 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHISA7A6NL88 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.13■■□□□ 1.45
SHISA7A6NL88 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.13■■□□□ 1.45
SHISA7A6NL88 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.13■■□□□ 1.45
SHISA7A6NL88 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SHISA7A6NL88 AL031432.3-201ENST00000607698 485 ntBASIC24.13■■□□□ 1.45
SHISA7A6NL88 AC106739.1-201ENST00000617035 715 ntBASIC24.13■■□□□ 1.45
SHISA7A6NL88 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SHISA7A6NL88 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SHISA7A6NL88 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.13■■□□□ 1.45
SHISA7A6NL88 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHISA7A6NL88 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHISA7A6NL88 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHISA7A6NL88 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHISA7A6NL88 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHISA7A6NL88 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.12■■□□□ 1.45
SHISA7A6NL88 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.12■■□□□ 1.45
SHISA7A6NL88 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.11■■□□□ 1.45
SHISA7A6NL88 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SHISA7A6NL88 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SHISA7A6NL88 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SHISA7A6NL88 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SHISA7A6NL88 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.1■■□□□ 1.45
SHISA7A6NL88 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
SHISA7A6NL88 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SHISA7A6NL88 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SHISA7A6NL88 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SHISA7A6NL88 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.09■■□□□ 1.45
SHISA7A6NL88 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SHISA7A6NL88 AC026271.2-201ENST00000428091 497 ntBASIC24.09■■□□□ 1.45
SHISA7A6NL88 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.09■■□□□ 1.45
SHISA7A6NL88 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.09■■□□□ 1.45
SHISA7A6NL88 RARRES2P6-201ENST00000567333 442 ntBASIC24.09■■□□□ 1.45
SHISA7A6NL88 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SHISA7A6NL88 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SHISA7A6NL88 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SHISA7A6NL88 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SHISA7A6NL88 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
SHISA7A6NL88 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SHISA7A6NL88 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.07■■□□□ 1.44
SHISA7A6NL88 PBX2P1-201ENST00000493219 1291 ntBASIC24.07■■□□□ 1.44
SHISA7A6NL88 SUDS3P1-201ENST00000505831 966 ntBASIC24.07■■□□□ 1.44
SHISA7A6NL88 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SHISA7A6NL88 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SHISA7A6NL88 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SHISA7A6NL88 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHISA7A6NL88 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHISA7A6NL88 SNX5-217ENST00000606557 1087 ntBASIC24.06■■□□□ 1.44
SHISA7A6NL88 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.06■■□□□ 1.44
SHISA7A6NL88 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SHISA7A6NL88 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHISA7A6NL88 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SHISA7A6NL88 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.05■■□□□ 1.44
SHISA7A6NL88 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.05■■□□□ 1.44
SHISA7A6NL88 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SHISA7A6NL88 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SHISA7A6NL88 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
SHISA7A6NL88 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
SHISA7A6NL88 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
SHISA7A6NL88 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHISA7A6NL88 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.04■■□□□ 1.44
SHISA7A6NL88 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.04■■□□□ 1.44
SHISA7A6NL88 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SHISA7A6NL88 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.04■■□□□ 1.44
SHISA7A6NL88 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.04■■□□□ 1.44
SHISA7A6NL88 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHISA7A6NL88 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms