Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRBV9A0A0B4J1U6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV9A0A0B4J1U6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 KRT18P10-201ENST00000388836 1287 ntBASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 AC097639.1-201ENST00000565519 1891 ntBASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 AC133561.1-201ENST00000568600 2415 ntBASIC18.68■□□□□ 0.58
TRBV9A0A0B4J1U6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV9A0A0B4J1U6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV9A0A0B4J1U6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
TRBV9A0A0B4J1U6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRBV9A0A0B4J1U6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRBV9A0A0B4J1U6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV9A0A0B4J1U6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV9A0A0B4J1U6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 AL592293.1-201ENST00000502889 1188 ntBASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 ABHD17AP5-201ENST00000580133 923 ntBASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 U85056.1-201ENST00000616429 682 ntBASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.66■□□□□ 0.58
TRBV9A0A0B4J1U6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV9A0A0B4J1U6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV9A0A0B4J1U6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV9A0A0B4J1U6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV9A0A0B4J1U6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV9A0A0B4J1U6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV9A0A0B4J1U6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
TRBV9A0A0B4J1U6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRBV9A0A0B4J1U6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV9A0A0B4J1U6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRBV9A0A0B4J1U6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV9A0A0B4J1U6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV9A0A0B4J1U6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV9A0A0B4J1U6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV9A0A0B4J1U6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV9A0A0B4J1U6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.61■□□□□ 0.57
TRBV9A0A0B4J1U6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV9A0A0B4J1U6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRBV9A0A0B4J1U6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRBV9A0A0B4J1U6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV9A0A0B4J1U6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRBV9A0A0B4J1U6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.6■□□□□ 0.57
TRBV9A0A0B4J1U6 AC079834.2-201ENST00000609776 1949 ntBASIC18.6■□□□□ 0.57
TRBV9A0A0B4J1U6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms