Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SAA2-SAA4A0A096LPE2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.27■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.26■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AL592293.1-201ENST00000502889 1188 ntBASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 FOXO3B-201ENST00000395675 1928 ntBASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 MIR6089-201ENST00000616698 64 ntBASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SPCS2P3-201ENST00000500401 656 ntBASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AC018755.3-202ENST00000596210 929 ntBASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 LINC01124-201ENST00000409786 2117 ntBASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA2-SAA4A0A096LPE2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA2-SAA4A0A096LPE2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA2-SAA4A0A096LPE2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms