Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.27■□□□□ 0.68
SAA2-SAA4A0A096LPE2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SAA2-SAA4A0A096LPE2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.27■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.26■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AL592293.1-201ENST00000502889 1188 ntBASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.24■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.22■□□□□ 0.67
SAA2-SAA4A0A096LPE2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.21■□□□□ 0.67
SAA2-SAA4A0A096LPE2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 FOXO3B-201ENST00000395675 1928 ntBASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 MIR6089-201ENST00000616698 64 ntBASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA2-SAA4A0A096LPE2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SPCS2P3-201ENST00000500401 656 ntBASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AC018755.3-202ENST00000596210 929 ntBASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 LINC01124-201ENST00000409786 2117 ntBASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.19■□□□□ 0.66
SAA2-SAA4A0A096LPE2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA2-SAA4A0A096LPE2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA2-SAA4A0A096LPE2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA2-SAA4A0A096LPE2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms