Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.48□□□□□ -0.253e-8■□□□□ 8.7
CSTF2TQ9H0L4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.273e-8■□□□□ 8.7
CSTF2TQ9H0L4 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.23□□□□□ -0.291e-6■□□□□ 8.7
CSTF2TQ9H0L4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.78□□□□□ -0.361e-6■□□□□ 8.7
CSTF2TQ9H0L4 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.491e-6■□□□□ 8.7
CSTF2TQ9H0L4 CDC45-208ENST00000471470 857 ntTSL 511.61□□□□□ -0.551e-6■□□□□ 8.7
CSTF2TQ9H0L4 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC11.33□□□□□ -0.63e-8■□□□□ 8.7
CSTF2TQ9H0L4 DDB1-223ENST00000543658 571 ntTSL 410.94□□□□□ -0.661e-6■□□□□ 8.7
CSTF2TQ9H0L4 DDX5-224ENST00000583239 474 ntTSL 410.68□□□□□ -0.75e-11■□□□□ 8.7
CSTF2TQ9H0L4 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.721e-6■□□□□ 8.7
CSTF2TQ9H0L4 DDB1-222ENST00000543627 540 ntTSL 510.38□□□□□ -0.751e-6■□□□□ 8.7
CSTF2TQ9H0L4 DDB1-214ENST00000539426 805 ntTSL 310.31□□□□□ -0.761e-6■□□□□ 8.7
CSTF2TQ9H0L4 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.781e-6■□□□□ 8.7
CSTF2TQ9H0L4 DDB1-221ENST00000543162 575 ntTSL 49.72□□□□□ -0.851e-6■□□□□ 8.7
CSTF2TQ9H0L4 PABPC1-224ENST00000610907 1569 ntTSL 1 (best) BASIC9.6□□□□□ -0.873e-8■□□□□ 8.7
CSTF2TQ9H0L4 DDB1-217ENST00000540166 3906 ntTSL 28.3□□□□□ -1.081e-6■□□□□ 8.7
CSTF2TQ9H0L4 PABPC1-202ENST00000517403 560 ntTSL 58.08□□□□□ -1.123e-8■□□□□ 8.7
CSTF2TQ9H0L4 DDB1-208ENST00000537120 1215 ntTSL 27.97□□□□□ -1.131e-6■□□□□ 8.7
CSTF2TQ9H0L4 PABPC1-223ENST00000523636 818 ntTSL 55.97□□□□□ -1.453e-8■□□□□ 8.7
CSTF2TQ9H0L4 PABPC1-207ENST00000518716 694 ntTSL 25.69□□□□□ -1.53e-8■□□□□ 8.7
CSTF2TQ9H0L4 PABPC1-211ENST00000519596 771 ntTSL 33.9□□□□□ -1.793e-8■□□□□ 8.7
CSTF2TQ9H0L4 ARL6IP4-217ENST00000540382 1677 ntTSL 523.25■■□□□ 1.318e-7■□□□□ 8.7
CSTF2TQ9H0L4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.278e-7■□□□□ 8.7
CSTF2TQ9H0L4 ARL6IP4-218ENST00000540708 1782 ntTSL 222.12■■□□□ 1.138e-7■□□□□ 8.7
CSTF2TQ9H0L4 ARL6IP4-209ENST00000442210 716 ntTSL 320.93■□□□□ 0.948e-7■□□□□ 8.7
CSTF2TQ9H0L4 ARL6IP4-214ENST00000536502 1273 ntTSL 219.81■□□□□ 0.768e-7■□□□□ 8.7
CSTF2TQ9H0L4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.53■□□□□ 0.728e-7■□□□□ 8.7
CSTF2TQ9H0L4 ARL6IP4-215ENST00000539576 1684 ntTSL 517.2■□□□□ 0.348e-7■□□□□ 8.7
CSTF2TQ9H0L4 SCAF8-204ENST00000461219 677 ntTSL 519.25■□□□□ 0.677e-8■□□□□ 8.7
CSTF2TQ9H0L4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.53■□□□□ 0.561e-6■□□□□ 8.7
CSTF2TQ9H0L4 PRR12-202ENST00000593853 265 ntTSL 318.29■□□□□ 0.525e-6■□□□□ 8.7
CSTF2TQ9H0L4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.117e-8■□□□□ 8.7
CSTF2TQ9H0L4 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.05□□□□□ -0.487e-8■□□□□ 8.7
CSTF2TQ9H0L4 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.567e-8■□□□□ 8.7
CSTF2TQ9H0L4 SCAF8-205ENST00000464628 468 ntTSL 510.93□□□□□ -0.667e-8■□□□□ 8.7
CSTF2TQ9H0L4 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC9.97□□□□□ -0.817e-8■□□□□ 8.7
CSTF2TQ9H0L4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.472e-7■□□□□ 8.7
CSTF2TQ9H0L4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.11■□□□□ 0.332e-7■□□□□ 8.7
CSTF2TQ9H0L4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.172e-7■□□□□ 8.7
CSTF2TQ9H0L4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.8■□□□□ 0.122e-7■□□□□ 8.7
CSTF2TQ9H0L4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.212e-7■□□□□ 8.7
CSTF2TQ9H0L4 CRELD1-204ENST00000414117 723 ntTSL 513.7□□□□□ -0.222e-7■□□□□ 8.7
CSTF2TQ9H0L4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.322e-7■□□□□ 8.7
CSTF2TQ9H0L4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.75□□□□□ -0.372e-7■□□□□ 8.7
CSTF2TQ9H0L4 CRELD1-207ENST00000465716 889 ntTSL 211.07□□□□□ -0.642e-7■□□□□ 8.7
CSTF2TQ9H0L4 ELOB-203ENST00000409906 991 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.82e-7■□□□□ 8.7
CSTF2TQ9H0L4 ELOB-205ENST00000572954 331 ntTSL 2 BASIC9.59□□□□□ -0.872e-7■□□□□ 8.7
CSTF2TQ9H0L4 ELOB-201ENST00000262306 582 ntTSL 2 BASIC9.32□□□□□ -0.922e-7■□□□□ 8.7
CSTF2TQ9H0L4 ELOB-204ENST00000494946 472 ntTSL 28.34□□□□□ -1.072e-7■□□□□ 8.7
CSTF2TQ9H0L4 USP34-204ENST00000453133 1409 ntTSL 58.14□□□□□ -1.112e-7■□□□□ 8.7
CSTF2TQ9H0L4 PCBP2-214ENST00000549272 445 ntTSL 26.98□□□□□ -1.297e-38■□□□□ 8.7
CSTF2TQ9H0L4 TMBIM1-211ENST00000440422 659 ntTSL 521.7■■□□□ 1.065e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-205ENST00000420341 361 ntTSL 414.35□□□□□ -0.115e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.225e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-213ENST00000444183 526 ntTSL 512.46□□□□□ -0.415e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-217ENST00000453281 534 ntTSL 212.46□□□□□ -0.415e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-208ENST00000434015 580 ntTSL 311.94□□□□□ -0.55e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-220ENST00000466012 572 ntTSL 511.63□□□□□ -0.555e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-223ENST00000495113 596 ntTSL 210.85□□□□□ -0.675e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-203ENST00000413976 348 ntTSL 410.57□□□□□ -0.725e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-209ENST00000437694 992 ntTSL 29.94□□□□□ -0.825e-6■□□□□ 8.6
CSTF2TQ9H0L4 TMBIM1-215ENST00000445635 1251 ntTSL 2 BASIC9.64□□□□□ -0.875e-6■□□□□ 8.6
CSTF2TQ9H0L4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.273e-6■□□□□ 8.6
CSTF2TQ9H0L4 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.33e-6■□□□□ 8.6
CSTF2TQ9H0L4 LENG8-203ENST00000421200 594 ntTSL 313.81□□□□□ -0.26e-34■□□□□ 8.6
CSTF2TQ9H0L4 CNOT1-215ENST00000569020 535 ntTSL 412.97□□□□□ -0.331e-7■□□□□ 8.6
CSTF2TQ9H0L4 CNOT1-206ENST00000564557 582 ntTSL 312.85□□□□□ -0.351e-7■□□□□ 8.6
CSTF2TQ9H0L4 CNOT1-220ENST00000569916 599 ntTSL 312.19□□□□□ -0.461e-7■□□□□ 8.6
CSTF2TQ9H0L4 CNOT1-213ENST00000568158 496 ntTSL 312.11□□□□□ -0.471e-7■□□□□ 8.6
CSTF2TQ9H0L4 CNOT1-217ENST00000569263 304 ntTSL 212.1□□□□□ -0.471e-7■□□□□ 8.6
CSTF2TQ9H0L4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.012e-10■□□□□ 8.6
CSTF2TQ9H0L4 ATP2A1-201ENST00000357084 3532 ntTSL 2 BASIC11.44□□□□□ -0.586e-8■□□□□ 8.6
CSTF2TQ9H0L4 ATP2A1-202ENST00000395503 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.716e-8■□□□□ 8.6
CSTF2TQ9H0L4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.062e-9■□□□□ 8.6
CSTF2TQ9H0L4 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.512e-9■□□□□ 8.6
CSTF2TQ9H0L4 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.122e-9■□□□□ 8.6
CSTF2TQ9H0L4 SHANK2-207ENST00000425049 557 ntTSL 415.65■□□□□ 0.19e-7■□□□□ 8.6
CSTF2TQ9H0L4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.68■□□□□ 0.744e-20■□□□□ 8.6
CSTF2TQ9H0L4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.394e-20■□□□□ 8.6
CSTF2TQ9H0L4 CYP2F2P-201ENST00000437853 1056 ntBASIC11.62□□□□□ -0.551e-13■□□□□ 8.6
CSTF2TQ9H0L4 CYP2F2P-202ENST00000641827 1004 ntBASIC9.37□□□□□ -0.911e-13■□□□□ 8.6
CSTF2TQ9H0L4 PEMT-208ENST00000472446 473 ntTSL 322.18■■□□□ 1.146e-6■□□□□ 8.5
CSTF2TQ9H0L4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22■■□□□ 1.116e-6■□□□□ 8.5
CSTF2TQ9H0L4 PEMT-207ENST00000461404 591 ntTSL 521.9■■□□□ 1.16e-6■□□□□ 8.5
CSTF2TQ9H0L4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.62■■□□□ 1.056e-6■□□□□ 8.5
CSTF2TQ9H0L4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.59■■□□□ 1.056e-6■□□□□ 8.5
CSTF2TQ9H0L4 PEMT-212ENST00000580147 708 ntTSL 321.5■■□□□ 1.036e-6■□□□□ 8.5
CSTF2TQ9H0L4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.03■□□□□ 0.646e-6■□□□□ 8.5
CSTF2TQ9H0L4 ELF2-205ENST00000420916 882 ntTSL 1 (best)16.69■□□□□ 0.266e-6■□□□□ 8.5
CSTF2TQ9H0L4 BANP-214ENST00000466847 772 ntTSL 216■□□□□ 0.156e-6■□□□□ 8.5
CSTF2TQ9H0L4 ELF2-212ENST00000514606 2219 ntTSL 215.92■□□□□ 0.146e-6■□□□□ 8.5
CSTF2TQ9H0L4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.36■□□□□ 0.056e-6■□□□□ 8.5
CSTF2TQ9H0L4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.24■□□□□ 0.036e-6■□□□□ 8.5
CSTF2TQ9H0L4 PUF60-205ENST00000524570 1934 ntTSL 214.68□□□□□ -0.066e-6■□□□□ 8.5
CSTF2TQ9H0L4 ASS1-207ENST00000467695 580 ntTSL 214.45□□□□□ -0.16e-6■□□□□ 8.5
CSTF2TQ9H0L4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.146e-6■□□□□ 8.5
CSTF2TQ9H0L4 PUF60-212ENST00000528320 922 ntTSL 214.04□□□□□ -0.166e-6■□□□□ 8.5
CSTF2TQ9H0L4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.84□□□□□ -0.196e-6■□□□□ 8.5
CSTF2TQ9H0L4 PEMT-205ENST00000421096 662 ntTSL 313.06□□□□□ -0.326e-6■□□□□ 8.5
CSTF2TQ9H0L4 UBE2I-219ENST00000568989 498 ntTSL 212.82□□□□□ -0.366e-6■□□□□ 8.5
Retrieved 100 of 19,151 protein–RNA pairs in 297.6 ms