RNA–Protein interactions for RNA: ENST00000409290.1

WIPF3-203, Transcript of WAS/WASL interacting protein family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene WIPF3, Length 4,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF3-203ENST00000409290 NISCHQ9Y2I1 1504 aa17.26■□□□□ 0.35
WIPF3-203ENST00000409290 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
WIPF3-203ENST00000409290 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
WIPF3-203ENST00000409290 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
WIPF3-203ENST00000409290 ABCC9O60706 1549 aa14.87□□□□□ -0.03
WIPF3-203ENST00000409290 CCDC180Q9P1Z9 1646 aa14.58□□□□□ -0.08
WIPF3-203ENST00000409290 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
WIPF3-203ENST00000409290 ZCCHC6Q5VYS8 1495 aaKnown RBP14.33□□□□□ -0.11
WIPF3-203ENST00000409290 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
WIPF3-203ENST00000409290 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
WIPF3-203ENST00000409290 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
WIPF3-203ENST00000409290 RB1CC1Q8TDY2 1594 aa14.01□□□□□ -0.17
WIPF3-203ENST00000409290 NACADO15069 1562 aa13.97□□□□□ -0.17
WIPF3-203ENST00000409290 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
WIPF3-203ENST00000409290 DCAF1Q9Y4B6 1507 aa13.86□□□□□ -0.19
WIPF3-203ENST00000409290 CHIC1Q5VXU3 224 aa13.71□□□□□ -0.21
WIPF3-203ENST00000409290 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.22
WIPF3-203ENST00000409290 MYO15BQ96JP2 1530 aa13.64□□□□□ -0.23
WIPF3-203ENST00000409290 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
WIPF3-203ENST00000409290 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
WIPF3-203ENST00000409290 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
WIPF3-203ENST00000409290 APLP2Q06481 763 aa13.52□□□□□ -0.24
WIPF3-203ENST00000409290 TTBK1Q5TCY1 1321 aaPredicted RBP13.52□□□□□ -0.24
WIPF3-203ENST00000409290 LOC105371045A0A1W2PR82 267 aa13.49□□□□□ -0.25
WIPF3-203ENST00000409290 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
WIPF3-203ENST00000409290 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
WIPF3-203ENST00000409290 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
WIPF3-203ENST00000409290 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
WIPF3-203ENST00000409290 PPARGC1BQ86YN6 1023 aaKnown RBP13.3□□□□□ -0.28
WIPF3-203ENST00000409290 FBLN2P98095 1184 aa13.24□□□□□ -0.29
WIPF3-203ENST00000409290 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
WIPF3-203ENST00000409290 WIZO95785 1651 aa13.21□□□□□ -0.29
WIPF3-203ENST00000409290 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
WIPF3-203ENST00000409290 SMARCA2P51531 1590 aa13.18□□□□□ -0.3
WIPF3-203ENST00000409290 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
WIPF3-203ENST00000409290 SMARCA4P51532 1647 aa13.16□□□□□ -0.3
WIPF3-203ENST00000409290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
WIPF3-203ENST00000409290 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
WIPF3-203ENST00000409290 CCDC88BA6NC98 1476 aa13.15□□□□□ -0.3
WIPF3-203ENST00000409290 WRNQ14191 1432 aaPredicted RBP eCLIP13.08□□□□□ -0.32
WIPF3-203ENST00000409290 BICRAQ9NZM4 1560 aa13.08□□□□□ -0.32
WIPF3-203ENST00000409290 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
WIPF3-203ENST00000409290 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
WIPF3-203ENST00000409290 P3H3Q8IVL6 736 aa13.06□□□□□ -0.32
WIPF3-203ENST00000409290 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
WIPF3-203ENST00000409290 CADPSQ9ULU8 1353 aa12.99□□□□□ -0.33
WIPF3-203ENST00000409290 ITGAEP38570 1179 aa12.98□□□□□ -0.33
WIPF3-203ENST00000409290 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
WIPF3-203ENST00000409290 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
WIPF3-203ENST00000409290 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
WIPF3-203ENST00000409290 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
WIPF3-203ENST00000409290 ABCC8Q09428 1581 aa12.94□□□□□ -0.34
WIPF3-203ENST00000409290 PDS5BQ9NTI5 1447 aa12.93□□□□□ -0.34
WIPF3-203ENST00000409290 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
WIPF3-203ENST00000409290 TRIM26Q12899 539 aaPredicted RBP12.92□□□□□ -0.34
WIPF3-203ENST00000409290 CC2D2AQ9P2K1 1620 aa12.9□□□□□ -0.34
WIPF3-203ENST00000409290 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
WIPF3-203ENST00000409290 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
WIPF3-203ENST00000409290 SOGA1O94964 1423 aa12.86□□□□□ -0.35
WIPF3-203ENST00000409290 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
WIPF3-203ENST00000409290 CUX2O14529 1486 aa12.83□□□□□ -0.36
WIPF3-203ENST00000409290 EEA1Q15075 1411 aa12.82□□□□□ -0.36
WIPF3-203ENST00000409290 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
WIPF3-203ENST00000409290 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
WIPF3-203ENST00000409290 FAM50AQ14320 339 aaKnown RBP12.8□□□□□ -0.36
WIPF3-203ENST00000409290 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
WIPF3-203ENST00000409290 NESP48681 1621 aa12.77□□□□□ -0.37
WIPF3-203ENST00000409290 HMGXB3Q12766 1538 aa12.74□□□□□ -0.37
WIPF3-203ENST00000409290 CARMIL1Q5VZK9 1371 aa12.74□□□□□ -0.37
WIPF3-203ENST00000409290 GOLGA3Q08378 1498 aa12.74□□□□□ -0.37
WIPF3-203ENST00000409290 CLIP1P30622 1438 aa12.73□□□□□ -0.37
WIPF3-203ENST00000409290 CFTRP13569 1480 aa12.69□□□□□ -0.38
WIPF3-203ENST00000409290 CEP162Q5TB80 1403 aa12.67□□□□□ -0.38
WIPF3-203ENST00000409290 CDK11AQ9UQ88 783 aaPredicted RBP12.67□□□□□ -0.38
WIPF3-203ENST00000409290 RUSC2Q8N2Y8 1516 aa12.65□□□□□ -0.38
WIPF3-203ENST00000409290 TNIKQ9UKE5 1360 aa12.65□□□□□ -0.38
WIPF3-203ENST00000409290 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
WIPF3-203ENST00000409290 ZNF777Q9ULD5 760 aaPredicted RBP12.65□□□□□ -0.38
WIPF3-203ENST00000409290 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
WIPF3-203ENST00000409290 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
WIPF3-203ENST00000409290 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
WIPF3-203ENST00000409290 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
WIPF3-203ENST00000409290 PEG3Q9GZU2 1588 aa12.61□□□□□ -0.39
WIPF3-203ENST00000409290 TRIM52Q96A61 297 aa12.57□□□□□ -0.4
WIPF3-203ENST00000409290 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
WIPF3-203ENST00000409290 KCNH8Q96L42 1107 aa12.54□□□□□ -0.4
WIPF3-203ENST00000409290 RAPGEF2Q9Y4G8 1499 aa12.53□□□□□ -0.4
WIPF3-203ENST00000409290 AQRO60306 1485 aaKnown RBP eCLIP12.52□□□□□ -0.44e-8■■□□□ 13.5
WIPF3-203ENST00000409290 IGF1RP08069 1367 aa12.52□□□□□ -0.41
WIPF3-203ENST00000409290 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
WIPF3-203ENST00000409290 GAPVD1Q14C86 1478 aa12.5□□□□□ -0.41
WIPF3-203ENST00000409290 PLEKHD1A6NEE1 506 aa12.5□□□□□ -0.41
WIPF3-203ENST00000409290 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
WIPF3-203ENST00000409290 MRC2Q9UBG0 1479 aa12.49□□□□□ -0.41
WIPF3-203ENST00000409290 CUX1P39880 1505 aa12.48□□□□□ -0.41
WIPF3-203ENST00000409290 CHIC2Q9UKJ5 165 aa12.47□□□□□ -0.41
WIPF3-203ENST00000409290 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
WIPF3-203ENST00000409290 JPH4Q96JJ6 628 aa12.46□□□□□ -0.41
WIPF3-203ENST00000409290 HRCP23327 699 aa12.46□□□□□ -0.42
WIPF3-203ENST00000409290 POLA1P09884 1462 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms