RNA–Protein interactions for RNA: ENST00000453133.1

USP34-204, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 5

Gene USP34, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-204ENST00000453133 AEBP2Q6ZN18 517 aaPredicted RBP26.4■■□□□ 1.82
USP34-204ENST00000453133 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
USP34-204ENST00000453133 PHF23Q9BUL5 403 aaPredicted RBP22.84■■□□□ 1.25
USP34-204ENST00000453133 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
USP34-204ENST00000453133 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
USP34-204ENST00000453133 FOXD1Q16676 465 aa20.75■□□□□ 0.91
USP34-204ENST00000453133 ADRA2BP18089 450 aa20.14■□□□□ 0.81
USP34-204ENST00000453133 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
USP34-204ENST00000453133 PIAS4Q8N2W9 510 aaPredicted RBP19.62■□□□□ 0.73
USP34-204ENST00000453133 MSH5O43196 834 aa19.01■□□□□ 0.63
USP34-204ENST00000453133 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
USP34-204ENST00000453133 KCNA4P22459 653 aa18.46■□□□□ 0.55
USP34-204ENST00000453133 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
USP34-204ENST00000453133 MAPK8IP2Q13387 824 aaPredicted RBP18.23■□□□□ 0.51
USP34-204ENST00000453133 NCBP3Q53F19 620 aaKnown RBP18.2■□□□□ 0.5
USP34-204ENST00000453133 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
USP34-204ENST00000453133 NPM3O75607 178 aaKnown RBP17.96■□□□□ 0.47
USP34-204ENST00000453133 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
USP34-204ENST00000453133 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
USP34-204ENST00000453133 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
USP34-204ENST00000453133 HOXD11P31277 338 aaPredicted RBP17.54■□□□□ 0.4
USP34-204ENST00000453133 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
USP34-204ENST00000453133 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
USP34-204ENST00000453133 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
USP34-204ENST00000453133 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
USP34-204ENST00000453133 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
USP34-204ENST00000453133 ZBTB22O15209 634 aa16.97■□□□□ 0.31
USP34-204ENST00000453133 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
USP34-204ENST00000453133 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
USP34-204ENST00000453133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■□□□□ 9
USP34-204ENST00000453133 MYCNP04198 464 aaPredicted RBP16.56■□□□□ 0.24
USP34-204ENST00000453133 U3KPZ7 1027 aaPredicted RBP16.52■□□□□ 0.23
USP34-204ENST00000453133 RNF39Q9H2S5 420 aa16.32■□□□□ 0.2
USP34-204ENST00000453133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
USP34-204ENST00000453133 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
USP34-204ENST00000453133 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
USP34-204ENST00000453133 ATXN8OSP0DMR3 200 aa16.23■□□□□ 0.19
USP34-204ENST00000453133 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
USP34-204ENST00000453133 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
USP34-204ENST00000453133 APLP2Q06481 763 aa16.1■□□□□ 0.17
USP34-204ENST00000453133 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
USP34-204ENST00000453133 CAPN15O75808 1086 aa15.98■□□□□ 0.15
USP34-204ENST00000453133 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
USP34-204ENST00000453133 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
USP34-204ENST00000453133 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
USP34-204ENST00000453133 ABCB7O75027 752 aa15.71■□□□□ 0.11
USP34-204ENST00000453133 POLA2Q14181 598 aa15.7■□□□□ 0.1
USP34-204ENST00000453133 DSG3P32926 999 aa15.61■□□□□ 0.09
USP34-204ENST00000453133 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
USP34-204ENST00000453133 FBLN2P98095 1184 aa15.44■□□□□ 0.06
USP34-204ENST00000453133 FKBP8Q14318 412 aa15.42■□□□□ 0.06
USP34-204ENST00000453133 ZBTB12Q9Y330 459 aaPredicted RBP15.37■□□□□ 0.05
USP34-204ENST00000453133 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
USP34-204ENST00000453133 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
USP34-204ENST00000453133 ZNF692Q9BU19 519 aaPredicted RBP15.02■□□□□ -0
USP34-204ENST00000453133 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
USP34-204ENST00000453133 SPDYE6P0CI01 402 aa15□□□□□ -0.01
USP34-204ENST00000453133 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
USP34-204ENST00000453133 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
USP34-204ENST00000453133 PROM2Q8N271 834 aa14.88□□□□□ -0.03
USP34-204ENST00000453133 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.03
USP34-204ENST00000453133 RBM42Q9BTD8 480 aaKnown RBP14.83□□□□□ -0.03
USP34-204ENST00000453133 FBXO3Q9UK99 471 aa14.75□□□□□ -0.05
USP34-204ENST00000453133 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
USP34-204ENST00000453133 REM2Q8IYK8 340 aaPredicted RBP14.59□□□□□ -0.07
USP34-204ENST00000453133 VASPP50552 380 aaPredicted RBP14.57□□□□□ -0.08
USP34-204ENST00000453133 STAG3Q9UJ98 1225 aa14.56□□□□□ -0.08
USP34-204ENST00000453133 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
USP34-204ENST00000453133 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
USP34-204ENST00000453133 PITPNM1O00562 1244 aa14.43□□□□□ -0.1
USP34-204ENST00000453133 MIER1Q8N108 512 aa14.42□□□□□ -0.1
USP34-204ENST00000453133 PLCD3Q8N3E9 789 aa14.42□□□□□ -0.1
USP34-204ENST00000453133 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
USP34-204ENST00000453133 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
USP34-204ENST00000453133 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
USP34-204ENST00000453133 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
USP34-204ENST00000453133 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
USP34-204ENST00000453133 AMER1Q5JTC6 1135 aaPredicted RBP14.29□□□□□ -0.12
USP34-204ENST00000453133 CREBZFQ9NS37 354 aa14.23□□□□□ -0.13
USP34-204ENST00000453133 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
USP34-204ENST00000453133 SPOCK2Q92563 424 aa14.19□□□□□ -0.14
USP34-204ENST00000453133 CHADLQ6NUI6 762 aa14.17□□□□□ -0.14
USP34-204ENST00000453133 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
USP34-204ENST00000453133 PRKAR2AP13861 404 aaKnown RBP14.09□□□□□ -0.15
USP34-204ENST00000453133 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.155e-9■■□□□ 13.6
USP34-204ENST00000453133 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
USP34-204ENST00000453133 PIP4P2Q8N4L2 257 aa14.06□□□□□ -0.16
USP34-204ENST00000453133 CIZ1Q9ULV3 898 aaPredicted RBP14□□□□□ -0.17
USP34-204ENST00000453133 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
USP34-204ENST00000453133 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
USP34-204ENST00000453133 NUBP1P53384 320 aa13.98□□□□□ -0.17
USP34-204ENST00000453133 PKD2Q13563 968 aa13.98□□□□□ -0.17
USP34-204ENST00000453133 DCAF8Q5TAQ9 597 aa13.93□□□□□ -0.18
USP34-204ENST00000453133 RASEFQ8IZ41 740 aa13.92□□□□□ -0.18
USP34-204ENST00000453133 ECM2O94769 699 aaPredicted RBP13.89□□□□□ -0.19
USP34-204ENST00000453133 FAM212AQ96EL1 285 aa13.88□□□□□ -0.19
USP34-204ENST00000453133 GSE1Q14687 1217 aa13.87□□□□□ -0.19
USP34-204ENST00000453133 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
USP34-204ENST00000453133 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
USP34-204ENST00000453133 RGL2O15211 777 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms