RNA–Protein interactions for RNA: ENST00000404724.7

CDC45-202, Transcript of cell division cycle 45, humanhuman

TSL 2 BASIC

Gene CDC45, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45-202ENST00000404724 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
CDC45-202ENST00000404724 ABCC9O60706 1549 aa30.73■■■□□ 2.51
CDC45-202ENST00000404724 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
CDC45-202ENST00000404724 RB1CC1Q8TDY2 1594 aa29.11■■■□□ 2.25
CDC45-202ENST00000404724 DNAJC5BQ9UF47 199 aa28.93■■■□□ 2.22
CDC45-202ENST00000404724 NACADO15069 1562 aa28.89■■■□□ 2.22
CDC45-202ENST00000404724 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
CDC45-202ENST00000404724 UNC13AQ9UPW8 1703 aa28.64■■■□□ 2.18
CDC45-202ENST00000404724 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
CDC45-202ENST00000404724 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
CDC45-202ENST00000404724 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
CDC45-202ENST00000404724 ZCCHC6Q5VYS8 1495 aaKnown RBP28.31■■■□□ 2.12
CDC45-202ENST00000404724 DCAF1Q9Y4B6 1507 aa28.11■■■□□ 2.09
CDC45-202ENST00000404724 SCRIBQ14160 1630 aa28■■■□□ 2.07
CDC45-202ENST00000404724 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
CDC45-202ENST00000404724 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
CDC45-202ENST00000404724 EIF4G1Q04637 1599 aaKnown RBP27.66■■■□□ 2.02
CDC45-202ENST00000404724 CECR2Q9BXF3 1484 aa27.62■■■□□ 2.01
CDC45-202ENST00000404724 NCAPD3P42695 1498 aa26.7■■□□□ 1.86
CDC45-202ENST00000404724 ATAD2BQ9ULI0 1458 aa26.67■■□□□ 1.86
CDC45-202ENST00000404724 SMARCA4P51532 1647 aa26.66■■□□□ 1.86
CDC45-202ENST00000404724 SMARCA2P51531 1590 aa26.52■■□□□ 1.84
CDC45-202ENST00000404724 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
CDC45-202ENST00000404724 NESP48681 1621 aa26.45■■□□□ 1.83
CDC45-202ENST00000404724 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.82
CDC45-202ENST00000404724 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
CDC45-202ENST00000404724 DNAJC5Q9H3Z4 198 aa26.4■■□□□ 1.82
CDC45-202ENST00000404724 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.81
CDC45-202ENST00000404724 BAZ1BQ9UIG0 1483 aaKnown RBP26.38■■□□□ 1.81
CDC45-202ENST00000404724 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
CDC45-202ENST00000404724 CUX2O14529 1486 aa26.35■■□□□ 1.81
CDC45-202ENST00000404724 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
CDC45-202ENST00000404724 WIZO95785 1651 aa26.09■■□□□ 1.77
CDC45-202ENST00000404724 LAMC3Q9Y6N6 1575 aa26.09■■□□□ 1.77
CDC45-202ENST00000404724 KIF21AQ7Z4S6 1674 aa26.08■■□□□ 1.77
CDC45-202ENST00000404724 PDS5BQ9NTI5 1447 aa25.89■■□□□ 1.74
CDC45-202ENST00000404724 CADPSQ9ULU8 1353 aa25.89■■□□□ 1.74
CDC45-202ENST00000404724 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
CDC45-202ENST00000404724 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
CDC45-202ENST00000404724 WDR62O43379 1518 aa25.71■■□□□ 1.71
CDC45-202ENST00000404724 TOP2AP11388 1531 aaKnown RBP25.65■■□□□ 1.7
CDC45-202ENST00000404724 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
CDC45-202ENST00000404724 CEP164Q9UPV0 1460 aa25.64■■□□□ 1.69
CDC45-202ENST00000404724 CFTRP13569 1480 aa25.62■■□□□ 1.69
CDC45-202ENST00000404724 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
CDC45-202ENST00000404724 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
CDC45-202ENST00000404724 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
CDC45-202ENST00000404724 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
CDC45-202ENST00000404724 ZNF608Q9ULD9 1512 aaPredicted RBP25.21■■□□□ 1.63
CDC45-202ENST00000404724 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
CDC45-202ENST00000404724 OSCARQ8IYS5 282 aa25.13■■□□□ 1.61
CDC45-202ENST00000404724 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
CDC45-202ENST00000404724 DNMBPQ6XZF7 1577 aa25.04■■□□□ 1.6
CDC45-202ENST00000404724 EIF4G3O43432 1585 aaKnown RBP25.02■■□□□ 1.6
CDC45-202ENST00000404724 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
CDC45-202ENST00000404724 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.583e-10■■■■■ 55.1
CDC45-202ENST00000404724 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
CDC45-202ENST00000404724 RIMBP3CA6NJZ7 1639 aa24.94■■□□□ 1.58
CDC45-202ENST00000404724 RIMBP3BA6NNM3 1639 aa24.94■■□□□ 1.58
CDC45-202ENST00000404724 RIMBP3Q9UFD9 1639 aa24.94■■□□□ 1.58
CDC45-202ENST00000404724 POLA1P09884 1462 aaPredicted RBP24.92■■□□□ 1.58
CDC45-202ENST00000404724 RAD54L2Q9Y4B4 1467 aa24.88■■□□□ 1.57
CDC45-202ENST00000404724 CHD1O14646 1710 aa24.87■■□□□ 1.57
CDC45-202ENST00000404724 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
CDC45-202ENST00000404724 CUX1P39880 1505 aa24.79■■□□□ 1.56
CDC45-202ENST00000404724 TDRD9Q8NDG6 1382 aaKnown RBP24.77■■□□□ 1.56
CDC45-202ENST00000404724 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
CDC45-202ENST00000404724 SOGA1O94964 1423 aa24.76■■□□□ 1.55
CDC45-202ENST00000404724 FBLN2P98095 1184 aa24.72■■□□□ 1.55
CDC45-202ENST00000404724 SNAPC4Q5SXM2 1469 aa24.66■■□□□ 1.54
CDC45-202ENST00000404724 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
CDC45-202ENST00000404724 CYB5RLQ6IPT4 315 aa24.64■■□□□ 1.53
CDC45-202ENST00000404724 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
CDC45-202ENST00000404724 WDR97A6NE52 1622 aa24.62■■□□□ 1.53
CDC45-202ENST00000404724 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
CDC45-202ENST00000404724 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
CDC45-202ENST00000404724 PBRM1Q86U86 1689 aa24.52■■□□□ 1.52
CDC45-202ENST00000404724 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
CDC45-202ENST00000404724 CHMP7Q8WUX9 453 aaPredicted RBP24.47■■□□□ 1.51
CDC45-202ENST00000404724 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
CDC45-202ENST00000404724 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
CDC45-202ENST00000404724 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
CDC45-202ENST00000404724 ABCA10Q8WWZ4 1543 aa24.44■■□□□ 1.5
CDC45-202ENST00000404724 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
CDC45-202ENST00000404724 BIVM-ERCC5R4GMW8 1640 aa24.33■■□□□ 1.48
CDC45-202ENST00000404724 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
CDC45-202ENST00000404724 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
CDC45-202ENST00000404724 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
CDC45-202ENST00000404724 ERCC6L2Q5T890 1561 aa24.28■■□□□ 1.48
CDC45-202ENST00000404724 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
CDC45-202ENST00000404724 GRIN2AQ12879 1464 aa24.25■■□□□ 1.47
CDC45-202ENST00000404724 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
CDC45-202ENST00000404724 NUP160Q12769 1436 aa24.16■■□□□ 1.46
CDC45-202ENST00000404724 FHAD1B1AJZ9 1412 aa24.11■■□□□ 1.45
CDC45-202ENST00000404724 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
CDC45-202ENST00000404724 SHROOM2Q13796 1616 aa24.09■■□□□ 1.45
CDC45-202ENST00000404724 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
CDC45-202ENST00000404724 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
CDC45-202ENST00000404724 JPH4Q96JJ6 628 aa23.89■■□□□ 1.41
CDC45-202ENST00000404724 IGF1RP08069 1367 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms