RNA–Protein interactions for RNA: ENST00000524570.5

PUF60-205, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 1,934 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-205ENST00000524570 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
PUF60-205ENST00000524570 CCDC180Q9P1Z9 1646 aa32.49■■■□□ 2.79
PUF60-205ENST00000524570 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
PUF60-205ENST00000524570 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
PUF60-205ENST00000524570 DCAF1Q9Y4B6 1507 aa30.86■■■□□ 2.53
PUF60-205ENST00000524570 ABCC9O60706 1549 aa30.8■■■□□ 2.52
PUF60-205ENST00000524570 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
PUF60-205ENST00000524570 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
PUF60-205ENST00000524570 NACADO15069 1562 aa30.24■■■□□ 2.43
PUF60-205ENST00000524570 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
PUF60-205ENST00000524570 RB1CC1Q8TDY2 1594 aa29.96■■■□□ 2.39
PUF60-205ENST00000524570 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
PUF60-205ENST00000524570 UNC13AQ9UPW8 1703 aa29.5■■■□□ 2.31
PUF60-205ENST00000524570 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
PUF60-205ENST00000524570 CECR2Q9BXF3 1484 aa29.2■■■□□ 2.27
PUF60-205ENST00000524570 RSF1Q96T23 1441 aaPredicted RBP29.14■■■□□ 2.26
PUF60-205ENST00000524570 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.251e-7■■□□□ 14.1
PUF60-205ENST00000524570 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.23
PUF60-205ENST00000524570 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
PUF60-205ENST00000524570 WIZO95785 1651 aa28.78■■■□□ 2.2
PUF60-205ENST00000524570 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
PUF60-205ENST00000524570 CHIC1Q5VXU3 224 aa28.4■■■□□ 2.14
PUF60-205ENST00000524570 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.13
PUF60-205ENST00000524570 PEG3Q9GZU2 1588 aa28.35■■■□□ 2.13
PUF60-205ENST00000524570 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
PUF60-205ENST00000524570 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.11
PUF60-205ENST00000524570 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
PUF60-205ENST00000524570 CCDC88BA6NC98 1476 aa28.17■■■□□ 2.1
PUF60-205ENST00000524570 DNAJC5BQ9UF47 199 aa28.16■■■□□ 2.1
PUF60-205ENST00000524570 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
PUF60-205ENST00000524570 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
PUF60-205ENST00000524570 HMGXB3Q12766 1538 aa27.9■■■□□ 2.06
PUF60-205ENST00000524570 CC2D2AQ9P2K1 1620 aa27.83■■■□□ 2.05
PUF60-205ENST00000524570 TRIM41Q8WV44 630 aa27.74■■■□□ 2.03
PUF60-205ENST00000524570 ABCC8Q09428 1581 aa27.67■■■□□ 2.02
PUF60-205ENST00000524570 LOC105371045A0A1W2PR82 267 aa27.4■■□□□ 1.98
PUF60-205ENST00000524570 CFTRP13569 1480 aa27.39■■□□□ 1.98
PUF60-205ENST00000524570 FAM9AQ8IZU1 332 aaPredicted RBP27.37■■□□□ 1.97
PUF60-205ENST00000524570 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
PUF60-205ENST00000524570 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
PUF60-205ENST00000524570 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
PUF60-205ENST00000524570 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
PUF60-205ENST00000524570 SOGA1O94964 1423 aa27.17■■□□□ 1.94
PUF60-205ENST00000524570 NESP48681 1621 aa27.13■■□□□ 1.93
PUF60-205ENST00000524570 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
PUF60-205ENST00000524570 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
PUF60-205ENST00000524570 CUX1P39880 1505 aa27.1■■□□□ 1.93
PUF60-205ENST00000524570 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
PUF60-205ENST00000524570 EHMT2Q96KQ7 1210 aa27.06■■□□□ 1.92
PUF60-205ENST00000524570 FANCD2Q9BXW9 1451 aa26.99■■□□□ 1.91
PUF60-205ENST00000524570 LAMC3Q9Y6N6 1575 aa26.95■■□□□ 1.9
PUF60-205ENST00000524570 EEA1Q15075 1411 aa26.92■■□□□ 1.9
PUF60-205ENST00000524570 CSRNP3Q8WYN3 585 aa26.88■■□□□ 1.89
PUF60-205ENST00000524570 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
PUF60-205ENST00000524570 FGD5Q6ZNL6 1462 aa26.76■■□□□ 1.87
PUF60-205ENST00000524570 DNMBPQ6XZF7 1577 aa26.73■■□□□ 1.87
PUF60-205ENST00000524570 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
PUF60-205ENST00000524570 KIF21AQ7Z4S6 1674 aa26.73■■□□□ 1.87
PUF60-205ENST00000524570 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
PUF60-205ENST00000524570 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.87
PUF60-205ENST00000524570 KIF21BO75037 1637 aa26.65■■□□□ 1.86
PUF60-205ENST00000524570 GOLGA3Q08378 1498 aa26.63■■□□□ 1.85
PUF60-205ENST00000524570 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
PUF60-205ENST00000524570 POLA1P09884 1462 aaPredicted RBP26.61■■□□□ 1.85
PUF60-205ENST00000524570 CUX2O14529 1486 aa26.59■■□□□ 1.85
PUF60-205ENST00000524570 RAD54L2Q9Y4B4 1467 aa26.59■■□□□ 1.85
PUF60-205ENST00000524570 TNIKQ9UKE5 1360 aa26.59■■□□□ 1.85
PUF60-205ENST00000524570 RAPGEF2Q9Y4G8 1499 aa26.58■■□□□ 1.85
PUF60-205ENST00000524570 UBTFP17480 764 aaKnown RBP26.55■■□□□ 1.84
PUF60-205ENST00000524570 PRXQ9BXM0 1461 aa26.54■■□□□ 1.84
PUF60-205ENST00000524570 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
PUF60-205ENST00000524570 ABCA10Q8WWZ4 1543 aa26.48■■□□□ 1.83
PUF60-205ENST00000524570 IGF1RP08069 1367 aa26.46■■□□□ 1.83
PUF60-205ENST00000524570 MRC2Q9UBG0 1479 aa26.43■■□□□ 1.82
PUF60-205ENST00000524570 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
PUF60-205ENST00000524570 WDR97A6NE52 1622 aa26.41■■□□□ 1.82
PUF60-205ENST00000524570 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
PUF60-205ENST00000524570 TDRD9Q8NDG6 1382 aaKnown RBP26.3■■□□□ 1.8
PUF60-205ENST00000524570 WDR62O43379 1518 aa26.3■■□□□ 1.8
PUF60-205ENST00000524570 CARMIL1Q5VZK9 1371 aa26.29■■□□□ 1.8
PUF60-205ENST00000524570 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
PUF60-205ENST00000524570 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
PUF60-205ENST00000524570 CLIP1P30622 1438 aa26.25■■□□□ 1.79
PUF60-205ENST00000524570 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
PUF60-205ENST00000524570 RANGAP1P46060 587 aaPredicted RBP26.22■■□□□ 1.79
PUF60-205ENST00000524570 GAPVD1Q14C86 1478 aa26.2■■□□□ 1.78
PUF60-205ENST00000524570 PCGF6Q9BYE7 350 aa26.18■■□□□ 1.78
PUF60-205ENST00000524570 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
PUF60-205ENST00000524570 CUL7Q14999 1698 aa26.14■■□□□ 1.77
PUF60-205ENST00000524570 AQRO60306 1485 aaKnown RBP eCLIP26.12■■□□□ 1.778e-7■■■■■ 58
PUF60-205ENST00000524570 ZNF608Q9ULD9 1512 aaPredicted RBP26.1■■□□□ 1.77
PUF60-205ENST00000524570 IFT140Q96RY7 1462 aa26.1■■□□□ 1.77
PUF60-205ENST00000524570 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
PUF60-205ENST00000524570 ARAP1Q96P48 1450 aa26.05■■□□□ 1.76
PUF60-205ENST00000524570 TRIM26Q12899 539 aaPredicted RBP26.05■■□□□ 1.76
PUF60-205ENST00000524570 VPS8Q8N3P4 1428 aa26.02■■□□□ 1.76
PUF60-205ENST00000524570 ARHGAP35Q9NRY4 1499 aa26■■□□□ 1.75
PUF60-205ENST00000524570 GRIN2BQ13224 1484 aa25.95■■□□□ 1.74
PUF60-205ENST00000524570 EIF4G3O43432 1585 aaKnown RBP25.94■■□□□ 1.74
PUF60-205ENST00000524570 ADAMTS12P58397 1594 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms