RNA–Protein interactions for RNA: ENST00000357084.7

ATP2A1-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 2 BASIC

Gene ATP2A1, Length 3,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-201ENST00000357084 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
ATP2A1-201ENST00000357084 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
ATP2A1-201ENST00000357084 ABCC9O60706 1549 aa19.65■□□□□ 0.74
ATP2A1-201ENST00000357084 HRCP23327 699 aa19.63■□□□□ 0.73
ATP2A1-201ENST00000357084 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
ATP2A1-201ENST00000357084 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
ATP2A1-201ENST00000357084 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
ATP2A1-201ENST00000357084 SUPT5HO00267 1087 aaKnown RBP19.47■□□□□ 0.71
ATP2A1-201ENST00000357084 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
ATP2A1-201ENST00000357084 MYT1Q01538 1121 aa19.18■□□□□ 0.66
ATP2A1-201ENST00000357084 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
ATP2A1-201ENST00000357084 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
ATP2A1-201ENST00000357084 MYO15BQ96JP2 1530 aa18.72■□□□□ 0.59
ATP2A1-201ENST00000357084 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
ATP2A1-201ENST00000357084 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
ATP2A1-201ENST00000357084 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
ATP2A1-201ENST00000357084 LOC105371045A0A1W2PR82 267 aa18.58■□□□□ 0.57
ATP2A1-201ENST00000357084 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
ATP2A1-201ENST00000357084 NACADO15069 1562 aa18.49■□□□□ 0.55
ATP2A1-201ENST00000357084 EHMT2Q96KQ7 1210 aa18.4■□□□□ 0.54
ATP2A1-201ENST00000357084 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
ATP2A1-201ENST00000357084 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
ATP2A1-201ENST00000357084 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
ATP2A1-201ENST00000357084 NEUROD1Q13562 356 aa18.22■□□□□ 0.51
ATP2A1-201ENST00000357084 GTF3C3Q9Y5Q9 886 aa18.17■□□□□ 0.5
ATP2A1-201ENST00000357084 TTBK1Q5TCY1 1321 aaPredicted RBP18.17■□□□□ 0.5
ATP2A1-201ENST00000357084 FAM9AQ8IZU1 332 aaPredicted RBP18.16■□□□□ 0.5
ATP2A1-201ENST00000357084 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
ATP2A1-201ENST00000357084 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
ATP2A1-201ENST00000357084 UNC13AQ9UPW8 1703 aa18.1■□□□□ 0.49
ATP2A1-201ENST00000357084 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
ATP2A1-201ENST00000357084 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
ATP2A1-201ENST00000357084 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
ATP2A1-201ENST00000357084 CENPBP07199 599 aaPredicted RBP17.89■□□□□ 0.45
ATP2A1-201ENST00000357084 PRKCSHP14314 528 aaPredicted RBP17.79■□□□□ 0.44
ATP2A1-201ENST00000357084 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
ATP2A1-201ENST00000357084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
ATP2A1-201ENST00000357084 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
ATP2A1-201ENST00000357084 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
ATP2A1-201ENST00000357084 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
ATP2A1-201ENST00000357084 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.41
ATP2A1-201ENST00000357084 ANP32EQ9BTT0 268 aa17.56■□□□□ 0.4
ATP2A1-201ENST00000357084 YTHDC1Q96MU7 727 aaKnown RBP17.53■□□□□ 0.4
ATP2A1-201ENST00000357084 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.4
ATP2A1-201ENST00000357084 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
ATP2A1-201ENST00000357084 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
ATP2A1-201ENST00000357084 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
ATP2A1-201ENST00000357084 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
ATP2A1-201ENST00000357084 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
ATP2A1-201ENST00000357084 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
ATP2A1-201ENST00000357084 WIZO95785 1651 aa17.25■□□□□ 0.35
ATP2A1-201ENST00000357084 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
ATP2A1-201ENST00000357084 TSHZ2Q9NRE2 1034 aa17.24■□□□□ 0.35
ATP2A1-201ENST00000357084 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
ATP2A1-201ENST00000357084 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
ATP2A1-201ENST00000357084 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
ATP2A1-201ENST00000357084 APLP2Q06481 763 aa17.13■□□□□ 0.33
ATP2A1-201ENST00000357084 SUPT16HQ9Y5B9 1047 aaKnown RBP17.13■□□□□ 0.33
ATP2A1-201ENST00000357084 MIER1Q8N108 512 aa17.12■□□□□ 0.33
ATP2A1-201ENST00000357084 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
ATP2A1-201ENST00000357084 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
ATP2A1-201ENST00000357084 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
ATP2A1-201ENST00000357084 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
ATP2A1-201ENST00000357084 NESP48681 1621 aa17.01■□□□□ 0.31
ATP2A1-201ENST00000357084 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
ATP2A1-201ENST00000357084 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
ATP2A1-201ENST00000357084 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
ATP2A1-201ENST00000357084 TOP2AP11388 1531 aaKnown RBP16.9■□□□□ 0.3
ATP2A1-201ENST00000357084 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
ATP2A1-201ENST00000357084 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
ATP2A1-201ENST00000357084 ANO8Q9HCE9 1232 aaPredicted RBP16.86■□□□□ 0.29
ATP2A1-201ENST00000357084 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
ATP2A1-201ENST00000357084 CEP162Q5TB80 1403 aa16.78■□□□□ 0.28
ATP2A1-201ENST00000357084 RBM19Q9Y4C8 960 aaKnown RBP16.76■□□□□ 0.27
ATP2A1-201ENST00000357084 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
ATP2A1-201ENST00000357084 SOGA1O94964 1423 aa16.74■□□□□ 0.27
ATP2A1-201ENST00000357084 BCANQ96GW7 911 aa16.73■□□□□ 0.27
ATP2A1-201ENST00000357084 MSH5O43196 834 aa16.71■□□□□ 0.27
ATP2A1-201ENST00000357084 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
ATP2A1-201ENST00000357084 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
ATP2A1-201ENST00000357084 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
ATP2A1-201ENST00000357084 CFTRP13569 1480 aa16.63■□□□□ 0.25
ATP2A1-201ENST00000357084 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
ATP2A1-201ENST00000357084 ITGAEP38570 1179 aa16.62■□□□□ 0.25
ATP2A1-201ENST00000357084 SALL2Q9Y467 1007 aaPredicted RBP16.61■□□□□ 0.25
ATP2A1-201ENST00000357084 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
ATP2A1-201ENST00000357084 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
ATP2A1-201ENST00000357084 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
ATP2A1-201ENST00000357084 KCNH8Q96L42 1107 aa16.57■□□□□ 0.24
ATP2A1-201ENST00000357084 CCDC136Q96JN2 1154 aa16.54■□□□□ 0.24
ATP2A1-201ENST00000357084 FKBP8Q14318 412 aa16.54■□□□□ 0.24
ATP2A1-201ENST00000357084 TNIKQ9UKE5 1360 aa16.52■□□□□ 0.23
ATP2A1-201ENST00000357084 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
ATP2A1-201ENST00000357084 UBE2Q2Q8WVN8 375 aa16.49■□□□□ 0.23
ATP2A1-201ENST00000357084 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
ATP2A1-201ENST00000357084 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
ATP2A1-201ENST00000357084 URB2Q14146 1524 aaKnown RBP16.43■□□□□ 0.22
ATP2A1-201ENST00000357084 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
ATP2A1-201ENST00000357084 HIRIP3Q9BW71 556 aaPredicted RBP16.41■□□□□ 0.22
ATP2A1-201ENST00000357084 FBLN2P98095 1184 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms