RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
PUF60-212ENST00000528320 ABCC9O60706 1549 aa33.57■■■□□ 2.96
PUF60-212ENST00000528320 CCDC180Q9P1Z9 1646 aa33.38■■■□□ 2.93
PUF60-212ENST00000528320 RB1CC1Q8TDY2 1594 aa31.89■■■□□ 2.7
PUF60-212ENST00000528320 DNAJC5BQ9UF47 199 aa31.72■■■□□ 2.67
PUF60-212ENST00000528320 NACADO15069 1562 aa31.65■■■□□ 2.66
PUF60-212ENST00000528320 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
PUF60-212ENST00000528320 PABPN1Q86U42 306 aaKnown RBP eCLIP31.28■■■□□ 2.63e-7■□□□□ 10.7
PUF60-212ENST00000528320 MYO15BQ96JP2 1530 aa31.2■■■□□ 2.59
PUF60-212ENST00000528320 UNC13AQ9UPW8 1703 aa31.09■■■□□ 2.57
PUF60-212ENST00000528320 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
PUF60-212ENST00000528320 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
PUF60-212ENST00000528320 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
PUF60-212ENST00000528320 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
PUF60-212ENST00000528320 SCRIBQ14160 1630 aa30.37■■■□□ 2.45
PUF60-212ENST00000528320 CC2D2AQ9P2K1 1620 aa30.3■■■□□ 2.44
PUF60-212ENST00000528320 CECR2Q9BXF3 1484 aa30.28■■■□□ 2.44
PUF60-212ENST00000528320 EIF4G1Q04637 1599 aaKnown RBP30.22■■■□□ 2.43
PUF60-212ENST00000528320 DNAJC5Q9H3Z4 198 aa29.28■■■□□ 2.28
PUF60-212ENST00000528320 NCAPD3P42695 1498 aa29.27■■■□□ 2.28
PUF60-212ENST00000528320 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
PUF60-212ENST00000528320 CUX2O14529 1486 aa29.04■■■□□ 2.24
PUF60-212ENST00000528320 SMARCA2P51531 1590 aa29.01■■■□□ 2.24
PUF60-212ENST00000528320 ERCC6Q03468 1493 aa29■■■□□ 2.23
PUF60-212ENST00000528320 SMARCA4P51532 1647 aa28.99■■■□□ 2.23
PUF60-212ENST00000528320 HMGXB3Q12766 1538 aa28.97■■■□□ 2.23
PUF60-212ENST00000528320 BAZ1AQ9NRL2 1556 aaPredicted RBP28.86■■■□□ 2.21
PUF60-212ENST00000528320 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
PUF60-212ENST00000528320 NESP48681 1621 aa28.79■■■□□ 2.2
PUF60-212ENST00000528320 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
PUF60-212ENST00000528320 MROH2BQ7Z745 1585 aa28.65■■■□□ 2.18
PUF60-212ENST00000528320 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
PUF60-212ENST00000528320 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
PUF60-212ENST00000528320 PDS5BQ9NTI5 1447 aa28.47■■■□□ 2.15
PUF60-212ENST00000528320 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
PUF60-212ENST00000528320 KIF21AQ7Z4S6 1674 aa28.35■■■□□ 2.13
PUF60-212ENST00000528320 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
PUF60-212ENST00000528320 WIZO95785 1651 aa28.26■■■□□ 2.11
PUF60-212ENST00000528320 MRC2Q9UBG0 1479 aa28.19■■■□□ 2.1
PUF60-212ENST00000528320 WDR62O43379 1518 aa28.11■■■□□ 2.09
PUF60-212ENST00000528320 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
PUF60-212ENST00000528320 CFTRP13569 1480 aa28■■■□□ 2.07
PUF60-212ENST00000528320 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
PUF60-212ENST00000528320 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
PUF60-212ENST00000528320 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
PUF60-212ENST00000528320 URB2Q14146 1524 aaKnown RBP27.77■■■□□ 2.04
PUF60-212ENST00000528320 OSCARQ8IYS5 282 aa27.76■■■□□ 2.03
PUF60-212ENST00000528320 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.02
PUF60-212ENST00000528320 PRDM2Q13029 1718 aa27.57■■■□□ 2
PUF60-212ENST00000528320 IFT140Q96RY7 1462 aa27.51■■□□□ 1.99
PUF60-212ENST00000528320 ZNF608Q9ULD9 1512 aaPredicted RBP27.45■■□□□ 1.98
PUF60-212ENST00000528320 TOPBP1Q92547 1522 aa27.44■■□□□ 1.98
PUF60-212ENST00000528320 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
PUF60-212ENST00000528320 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
PUF60-212ENST00000528320 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
PUF60-212ENST00000528320 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
PUF60-212ENST00000528320 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
PUF60-212ENST00000528320 EIF4G3O43432 1585 aaKnown RBP27.24■■□□□ 1.95
PUF60-212ENST00000528320 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
PUF60-212ENST00000528320 AQRO60306 1485 aaKnown RBP eCLIP27.21■■□□□ 1.951e-6■■■■■ 58
PUF60-212ENST00000528320 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
PUF60-212ENST00000528320 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
PUF60-212ENST00000528320 POLA1P09884 1462 aaPredicted RBP27.15■■□□□ 1.94
PUF60-212ENST00000528320 FBLN2P98095 1184 aa27.09■■□□□ 1.93
PUF60-212ENST00000528320 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
PUF60-212ENST00000528320 SOGA1O94964 1423 aa27.07■■□□□ 1.92
PUF60-212ENST00000528320 RAD54L2Q9Y4B4 1467 aa27.06■■□□□ 1.92
PUF60-212ENST00000528320 CHD1O14646 1710 aa27.05■■□□□ 1.92
PUF60-212ENST00000528320 TDRD9Q8NDG6 1382 aaKnown RBP27.03■■□□□ 1.92
PUF60-212ENST00000528320 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
PUF60-212ENST00000528320 WDR97A6NE52 1622 aa26.93■■□□□ 1.9
PUF60-212ENST00000528320 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
PUF60-212ENST00000528320 CUX1P39880 1505 aa26.9■■□□□ 1.9
PUF60-212ENST00000528320 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
PUF60-212ENST00000528320 CHMP7Q8WUX9 453 aaPredicted RBP26.89■■□□□ 1.9
PUF60-212ENST00000528320 MAGI1Q96QZ7 1491 aaPredicted RBP26.85■■□□□ 1.89
PUF60-212ENST00000528320 TRHP20396 242 aaPredicted RBP26.84■■□□□ 1.89
PUF60-212ENST00000528320 GRIN2BQ13224 1484 aa26.83■■□□□ 1.89
PUF60-212ENST00000528320 CLASP1Q7Z460 1538 aa26.79■■□□□ 1.88
PUF60-212ENST00000528320 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
PUF60-212ENST00000528320 SYNJ2O15056 1496 aa26.76■■□□□ 1.87
PUF60-212ENST00000528320 GAPVD1Q14C86 1478 aa26.72■■□□□ 1.87
PUF60-212ENST00000528320 ABCA10Q8WWZ4 1543 aa26.66■■□□□ 1.86
PUF60-212ENST00000528320 PBRM1Q86U86 1689 aa26.61■■□□□ 1.85
PUF60-212ENST00000528320 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
PUF60-212ENST00000528320 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
PUF60-212ENST00000528320 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
PUF60-212ENST00000528320 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
PUF60-212ENST00000528320 GRIN2AQ12879 1464 aa26.47■■□□□ 1.83
PUF60-212ENST00000528320 NUP160Q12769 1436 aa26.41■■□□□ 1.82
PUF60-212ENST00000528320 FHAD1B1AJZ9 1412 aa26.39■■□□□ 1.81
PUF60-212ENST00000528320 ADAMTS12P58397 1594 aa26.38■■□□□ 1.81
PUF60-212ENST00000528320 CEP170Q5SW79 1584 aa26.35■■□□□ 1.81
PUF60-212ENST00000528320 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
PUF60-212ENST00000528320 ERICH3Q5RHP9 1530 aa26.32■■□□□ 1.8
PUF60-212ENST00000528320 SHROOM2Q13796 1616 aa26.27■■□□□ 1.8
PUF60-212ENST00000528320 JPH4Q96JJ6 628 aa26.2■■□□□ 1.78
PUF60-212ENST00000528320 PRG4Q92954 1404 aaPredicted RBP26.17■■□□□ 1.78
PUF60-212ENST00000528320 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
PUF60-212ENST00000528320 IGF1RP08069 1367 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms