Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.8■■□□□ 1.88
GNEQ9Y223 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.8■■□□□ 1.88
GNEQ9Y223 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.8■■□□□ 1.88
GNEQ9Y223 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.8■■□□□ 1.88
GNEQ9Y223 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
GNEQ9Y223 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.8■■□□□ 1.88
GNEQ9Y223 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
GNEQ9Y223 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
GNEQ9Y223 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
GNEQ9Y223 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
GNEQ9Y223 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.77■■□□□ 1.88
GNEQ9Y223 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
GNEQ9Y223 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.77■■□□□ 1.88
GNEQ9Y223 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
GNEQ9Y223 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.77■■□□□ 1.88
GNEQ9Y223 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
GNEQ9Y223 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
GNEQ9Y223 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
GNEQ9Y223 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
GNEQ9Y223 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.76■■□□□ 1.87
GNEQ9Y223 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
GNEQ9Y223 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
GNEQ9Y223 AC011551.1-201ENST00000614101 683 ntBASIC26.75■■□□□ 1.87
GNEQ9Y223 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
GNEQ9Y223 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
GNEQ9Y223 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
GNEQ9Y223 AC142086.6-201ENST00000621154 1765 ntBASIC26.74■■□□□ 1.87
GNEQ9Y223 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.73■■□□□ 1.87
GNEQ9Y223 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
GNEQ9Y223 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
GNEQ9Y223 AC131281.2-201ENST00000520478 145 ntBASIC26.73■■□□□ 1.87
GNEQ9Y223 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.73■■□□□ 1.87
GNEQ9Y223 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
GNEQ9Y223 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.73■■□□□ 1.87
GNEQ9Y223 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
GNEQ9Y223 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
GNEQ9Y223 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
GNEQ9Y223 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.72■■□□□ 1.87
GNEQ9Y223 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.72■■□□□ 1.87
GNEQ9Y223 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.72■■□□□ 1.87
GNEQ9Y223 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.72■■□□□ 1.87
GNEQ9Y223 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.72■■□□□ 1.87
GNEQ9Y223 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
GNEQ9Y223 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.72■■□□□ 1.87
GNEQ9Y223 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
GNEQ9Y223 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
GNEQ9Y223 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.71■■□□□ 1.87
GNEQ9Y223 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.71■■□□□ 1.87
GNEQ9Y223 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.71■■□□□ 1.87
GNEQ9Y223 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.71■■□□□ 1.87
GNEQ9Y223 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.71■■□□□ 1.87
GNEQ9Y223 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
GNEQ9Y223 MIR638-201ENST00000385237 100 ntBASIC26.7■■□□□ 1.86
GNEQ9Y223 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.7■■□□□ 1.86
GNEQ9Y223 AC010997.5-201ENST00000609182 354 ntBASIC26.7■■□□□ 1.86
GNEQ9Y223 AL117332.1-201ENST00000622628 974 ntBASIC26.7■■□□□ 1.86
GNEQ9Y223 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
GNEQ9Y223 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.69■■□□□ 1.86
GNEQ9Y223 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.69■■□□□ 1.86
GNEQ9Y223 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.69■■□□□ 1.86
GNEQ9Y223 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.69■■□□□ 1.86
GNEQ9Y223 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.69■■□□□ 1.86
GNEQ9Y223 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
GNEQ9Y223 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.68■■□□□ 1.86
GNEQ9Y223 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
GNEQ9Y223 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
GNEQ9Y223 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.68■■□□□ 1.86
GNEQ9Y223 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
GNEQ9Y223 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
GNEQ9Y223 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
GNEQ9Y223 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.67■■□□□ 1.86
GNEQ9Y223 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.67■■□□□ 1.86
GNEQ9Y223 MIR3621-201ENST00000580529 85 ntBASIC26.67■■□□□ 1.86
GNEQ9Y223 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.67■■□□□ 1.86
GNEQ9Y223 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
GNEQ9Y223 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
GNEQ9Y223 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.66■■□□□ 1.86
GNEQ9Y223 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
GNEQ9Y223 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.66■■□□□ 1.86
GNEQ9Y223 MIR6724-1-201ENST00000616420 92 ntBASIC26.66■■□□□ 1.86
GNEQ9Y223 MIR6724-2-201ENST00000616483 92 ntBASIC26.66■■□□□ 1.86
GNEQ9Y223 MIR6724-4-201ENST00000617390 92 ntBASIC26.66■■□□□ 1.86
GNEQ9Y223 MIR6724-3-201ENST00000622482 92 ntBASIC26.66■■□□□ 1.86
GNEQ9Y223 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
GNEQ9Y223 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.65■■□□□ 1.86
GNEQ9Y223 AL139246.5-201ENST00000606645 996 ntBASIC26.65■■□□□ 1.86
GNEQ9Y223 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
GNEQ9Y223 MIR935-201ENST00000401179 91 ntBASIC26.64■■□□□ 1.86
GNEQ9Y223 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.64■■□□□ 1.85
GNEQ9Y223 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.63■■□□□ 1.85
GNEQ9Y223 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
GNEQ9Y223 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
GNEQ9Y223 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
GNEQ9Y223 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.63■■□□□ 1.85
GNEQ9Y223 MTDHP2-201ENST00000601468 714 ntBASIC26.63■■□□□ 1.85
GNEQ9Y223 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
GNEQ9Y223 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
GNEQ9Y223 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.63■■□□□ 1.85
GNEQ9Y223 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
GNEQ9Y223 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms