Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
KCNF1Q9H3M0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
KCNF1Q9H3M0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.02■■□□□ 1.76
KCNF1Q9H3M0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KCNF1Q9H3M0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
KCNF1Q9H3M0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KCNF1Q9H3M0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.76
KCNF1Q9H3M0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.76
KCNF1Q9H3M0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
KCNF1Q9H3M0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
KCNF1Q9H3M0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
KCNF1Q9H3M0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
KCNF1Q9H3M0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
KCNF1Q9H3M0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
KCNF1Q9H3M0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.01■■□□□ 1.75
KCNF1Q9H3M0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
KCNF1Q9H3M0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
KCNF1Q9H3M0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26■■□□□ 1.75
KCNF1Q9H3M0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26■■□□□ 1.75
KCNF1Q9H3M0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
KCNF1Q9H3M0 DUX4L28-201ENST00000623687 678 ntBASIC26■■□□□ 1.75
KCNF1Q9H3M0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26■■□□□ 1.75
KCNF1Q9H3M0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
KCNF1Q9H3M0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
KCNF1Q9H3M0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
KCNF1Q9H3M0 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.99■■□□□ 1.75
KCNF1Q9H3M0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
KCNF1Q9H3M0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.99■■□□□ 1.75
KCNF1Q9H3M0 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.99■■□□□ 1.75
KCNF1Q9H3M0 SUZ12P1-203ENST00000578195 985 ntBASIC25.99■■□□□ 1.75
KCNF1Q9H3M0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
KCNF1Q9H3M0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.99■■□□□ 1.75
KCNF1Q9H3M0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
KCNF1Q9H3M0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
KCNF1Q9H3M0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.98■■□□□ 1.75
KCNF1Q9H3M0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
KCNF1Q9H3M0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.98■■□□□ 1.75
KCNF1Q9H3M0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
KCNF1Q9H3M0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
KCNF1Q9H3M0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.97■■□□□ 1.75
KCNF1Q9H3M0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.97■■□□□ 1.75
KCNF1Q9H3M0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
KCNF1Q9H3M0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
KCNF1Q9H3M0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
KCNF1Q9H3M0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
KCNF1Q9H3M0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
KCNF1Q9H3M0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
KCNF1Q9H3M0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
KCNF1Q9H3M0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
KCNF1Q9H3M0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
KCNF1Q9H3M0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
KCNF1Q9H3M0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
KCNF1Q9H3M0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
KCNF1Q9H3M0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
KCNF1Q9H3M0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
KCNF1Q9H3M0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
KCNF1Q9H3M0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.94■■□□□ 1.74
KCNF1Q9H3M0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.94■■□□□ 1.74
KCNF1Q9H3M0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
KCNF1Q9H3M0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
KCNF1Q9H3M0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
KCNF1Q9H3M0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.93■■□□□ 1.74
KCNF1Q9H3M0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
KCNF1Q9H3M0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
KCNF1Q9H3M0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
KCNF1Q9H3M0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.91■■□□□ 1.74
KCNF1Q9H3M0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
KCNF1Q9H3M0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
KCNF1Q9H3M0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
KCNF1Q9H3M0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
KCNF1Q9H3M0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.9■■□□□ 1.74
KCNF1Q9H3M0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
KCNF1Q9H3M0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
KCNF1Q9H3M0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
KCNF1Q9H3M0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
KCNF1Q9H3M0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
KCNF1Q9H3M0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
KCNF1Q9H3M0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
KCNF1Q9H3M0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.89■■□□□ 1.74
KCNF1Q9H3M0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
KCNF1Q9H3M0 AL117328.2-201ENST00000624617 1940 ntBASIC25.88■■□□□ 1.73
KCNF1Q9H3M0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
KCNF1Q9H3M0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.88■■□□□ 1.73
KCNF1Q9H3M0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.88■■□□□ 1.73
KCNF1Q9H3M0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KCNF1Q9H3M0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KCNF1Q9H3M0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNF1Q9H3M0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
KCNF1Q9H3M0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.86■■□□□ 1.73
KCNF1Q9H3M0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KCNF1Q9H3M0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms