Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.84■■□□□ 1.09
POLR2J3Q9H1A7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.84■■□□□ 1.09
POLR2J3Q9H1A7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
POLR2J3Q9H1A7 MIR7108-201ENST00000614319 87 ntBASIC21.84■■□□□ 1.09
POLR2J3Q9H1A7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POLR2J3Q9H1A7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POLR2J3Q9H1A7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
POLR2J3Q9H1A7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.83■■□□□ 1.09
POLR2J3Q9H1A7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
POLR2J3Q9H1A7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
POLR2J3Q9H1A7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.83■■□□□ 1.09
POLR2J3Q9H1A7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.83■■□□□ 1.09
POLR2J3Q9H1A7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
POLR2J3Q9H1A7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
POLR2J3Q9H1A7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
POLR2J3Q9H1A7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLR2J3Q9H1A7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLR2J3Q9H1A7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLR2J3Q9H1A7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR2J3Q9H1A7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.81■■□□□ 1.08
POLR2J3Q9H1A7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR2J3Q9H1A7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
POLR2J3Q9H1A7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR2J3Q9H1A7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.81■■□□□ 1.08
POLR2J3Q9H1A7 ECEL1P2-201ENST00000461596 1295 ntBASIC21.81■■□□□ 1.08
POLR2J3Q9H1A7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
POLR2J3Q9H1A7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR2J3Q9H1A7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR2J3Q9H1A7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR2J3Q9H1A7 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR2J3Q9H1A7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR2J3Q9H1A7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.79■■□□□ 1.08
POLR2J3Q9H1A7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
POLR2J3Q9H1A7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
POLR2J3Q9H1A7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR2J3Q9H1A7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
POLR2J3Q9H1A7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR2J3Q9H1A7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
POLR2J3Q9H1A7 LINC01124-201ENST00000409786 2117 ntBASIC21.79■■□□□ 1.08
POLR2J3Q9H1A7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 SLC6A10P-202ENST00000431994 2058 ntBASIC21.78■■□□□ 1.08
POLR2J3Q9H1A7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR2J3Q9H1A7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR2J3Q9H1A7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR2J3Q9H1A7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR2J3Q9H1A7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR2J3Q9H1A7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR2J3Q9H1A7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
POLR2J3Q9H1A7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
POLR2J3Q9H1A7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
POLR2J3Q9H1A7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
POLR2J3Q9H1A7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR2J3Q9H1A7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR2J3Q9H1A7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.76■■□□□ 1.07
POLR2J3Q9H1A7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.76■■□□□ 1.07
POLR2J3Q9H1A7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
POLR2J3Q9H1A7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 RP9P-202ENST00000450133 1212 ntBASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR2J3Q9H1A7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR2J3Q9H1A7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR2J3Q9H1A7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.74■■□□□ 1.07
POLR2J3Q9H1A7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR2J3Q9H1A7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR2J3Q9H1A7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR2J3Q9H1A7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR2J3Q9H1A7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR2J3Q9H1A7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.73■■□□□ 1.07
POLR2J3Q9H1A7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.73■■□□□ 1.07
POLR2J3Q9H1A7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
POLR2J3Q9H1A7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms