Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDHD3Q9BSH5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HDHD3Q9BSH5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDHD3Q9BSH5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HDHD3Q9BSH5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDHD3Q9BSH5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDHD3Q9BSH5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.99■□□□□ 0.79
HDHD3Q9BSH5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 AL157400.5-201ENST00000507624 621 ntBASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDHD3Q9BSH5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HDHD3Q9BSH5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
HDHD3Q9BSH5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDHD3Q9BSH5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDHD3Q9BSH5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDHD3Q9BSH5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDHD3Q9BSH5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDHD3Q9BSH5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDHD3Q9BSH5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
HDHD3Q9BSH5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HDHD3Q9BSH5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDHD3Q9BSH5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDHD3Q9BSH5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HDHD3Q9BSH5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.95■□□□□ 0.78
HDHD3Q9BSH5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.95■□□□□ 0.78
HDHD3Q9BSH5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HDHD3Q9BSH5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDHD3Q9BSH5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HDHD3Q9BSH5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.94■□□□□ 0.78
HDHD3Q9BSH5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDHD3Q9BSH5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDHD3Q9BSH5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDHD3Q9BSH5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HDHD3Q9BSH5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDHD3Q9BSH5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.93■□□□□ 0.78
HDHD3Q9BSH5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDHD3Q9BSH5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HDHD3Q9BSH5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HDHD3Q9BSH5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.93■□□□□ 0.78
HDHD3Q9BSH5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDHD3Q9BSH5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.91■□□□□ 0.78
HDHD3Q9BSH5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDHD3Q9BSH5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HDHD3Q9BSH5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDHD3Q9BSH5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.91■□□□□ 0.78
HDHD3Q9BSH5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HDHD3Q9BSH5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDHD3Q9BSH5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HDHD3Q9BSH5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDHD3Q9BSH5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDHD3Q9BSH5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HDHD3Q9BSH5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.9■□□□□ 0.78
HDHD3Q9BSH5 AC025884.2-201ENST00000553429 711 ntBASIC19.9■□□□□ 0.78
HDHD3Q9BSH5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HDHD3Q9BSH5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HDHD3Q9BSH5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HDHD3Q9BSH5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 AC060814.1-201ENST00000554326 538 ntBASIC19.89■□□□□ 0.77
HDHD3Q9BSH5 LINC00543-201ENST00000567234 1845 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms