Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NPIPB3Q92617 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPB3Q92617 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPB3Q92617 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPB3Q92617 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPB3Q92617 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPB3Q92617 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPB3Q92617 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPB3Q92617 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPB3Q92617 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NPIPB3Q92617 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.63■□□□□ 0.57
NPIPB3Q92617 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPB3Q92617 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPB3Q92617 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.63■□□□□ 0.57
NPIPB3Q92617 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPB3Q92617 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPB3Q92617 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.62■□□□□ 0.57
NPIPB3Q92617 AL157400.5-201ENST00000507624 621 ntBASIC18.62■□□□□ 0.57
NPIPB3Q92617 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPB3Q92617 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.62■□□□□ 0.57
NPIPB3Q92617 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.62■□□□□ 0.57
NPIPB3Q92617 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPB3Q92617 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPB3Q92617 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPB3Q92617 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NPIPB3Q92617 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPB3Q92617 AC025884.2-201ENST00000553429 711 ntBASIC18.61■□□□□ 0.57
NPIPB3Q92617 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.61■□□□□ 0.57
NPIPB3Q92617 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPB3Q92617 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPB3Q92617 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPB3Q92617 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
NPIPB3Q92617 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPB3Q92617 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPB3Q92617 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPB3Q92617 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPB3Q92617 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPB3Q92617 MIR3960-201ENST00000583311 91 ntBASIC18.6■□□□□ 0.57
NPIPB3Q92617 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPB3Q92617 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPB3Q92617 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPB3Q92617 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.6■□□□□ 0.57
NPIPB3Q92617 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPB3Q92617 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPB3Q92617 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NPIPB3Q92617 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
NPIPB3Q92617 AC060814.1-201ENST00000554326 538 ntBASIC18.59■□□□□ 0.57
NPIPB3Q92617 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
NPIPB3Q92617 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPB3Q92617 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPB3Q92617 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
NPIPB3Q92617 SMPD5-203ENST00000639008 1464 ntBASIC18.58■□□□□ 0.57
NPIPB3Q92617 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPB3Q92617 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
NPIPB3Q92617 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.58■□□□□ 0.56
NPIPB3Q92617 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB3Q92617 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPB3Q92617 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPB3Q92617 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB3Q92617 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB3Q92617 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB3Q92617 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPB3Q92617 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB3Q92617 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NPIPB3Q92617 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB3Q92617 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
NPIPB3Q92617 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB3Q92617 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NPIPB3Q92617 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB3Q92617 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.56■□□□□ 0.56
NPIPB3Q92617 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB3Q92617 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB3Q92617 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB3Q92617 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB3Q92617 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB3Q92617 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.56■□□□□ 0.56
NPIPB3Q92617 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NPIPB3Q92617 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NPIPB3Q92617 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB3Q92617 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB3Q92617 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NPIPB3Q92617 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB3Q92617 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NPIPB3Q92617 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.55■□□□□ 0.56
NPIPB3Q92617 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms