Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AC097639.1-201ENST00000565519 1891 ntBASIC30.5■■■□□ 2.47
CCDC30Q5VVM6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.49■■■□□ 2.47
CCDC30Q5VVM6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC30Q5VVM6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC30Q5VVM6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC30Q5VVM6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.49■■■□□ 2.47
CCDC30Q5VVM6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.49■■■□□ 2.47
CCDC30Q5VVM6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.49■■■□□ 2.47
CCDC30Q5VVM6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC30Q5VVM6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CCDC30Q5VVM6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.48■■■□□ 2.47
CCDC30Q5VVM6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.48■■■□□ 2.47
CCDC30Q5VVM6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC30Q5VVM6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
CCDC30Q5VVM6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.47■■■□□ 2.47
CCDC30Q5VVM6 AL451085.2-201ENST00000605085 799 ntBASIC30.47■■■□□ 2.47
CCDC30Q5VVM6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
CCDC30Q5VVM6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC30Q5VVM6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.47■■■□□ 2.47
CCDC30Q5VVM6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC30Q5VVM6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.46■■■□□ 2.47
CCDC30Q5VVM6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC30Q5VVM6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC30Q5VVM6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.46■■■□□ 2.47
CCDC30Q5VVM6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.46■■■□□ 2.47
CCDC30Q5VVM6 AC145676.1-201ENST00000514988 2004 ntBASIC30.46■■■□□ 2.47
CCDC30Q5VVM6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC30Q5VVM6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC30Q5VVM6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC30Q5VVM6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC30Q5VVM6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
CCDC30Q5VVM6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC30Q5VVM6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC30Q5VVM6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.44■■■□□ 2.46
CCDC30Q5VVM6 AL592295.1-201ENST00000400984 884 ntBASIC30.44■■■□□ 2.46
CCDC30Q5VVM6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.43■■■□□ 2.46
CCDC30Q5VVM6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
CCDC30Q5VVM6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
CCDC30Q5VVM6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC30Q5VVM6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC30Q5VVM6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC30.42■■■□□ 2.46
CCDC30Q5VVM6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.42■■■□□ 2.46
CCDC30Q5VVM6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC30Q5VVM6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
CCDC30Q5VVM6 AL031848.2-201ENST00000607670 837 ntBASIC30.42■■■□□ 2.46
CCDC30Q5VVM6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
CCDC30Q5VVM6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
CCDC30Q5VVM6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.41■■■□□ 2.46
CCDC30Q5VVM6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC30Q5VVM6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.41■■■□□ 2.46
CCDC30Q5VVM6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
CCDC30Q5VVM6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC30Q5VVM6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC30Q5VVM6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC30Q5VVM6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.39■■■□□ 2.46
CCDC30Q5VVM6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC30Q5VVM6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC30Q5VVM6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.45
CCDC30Q5VVM6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC30Q5VVM6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC30Q5VVM6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC30Q5VVM6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC30Q5VVM6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC30Q5VVM6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.38■■■□□ 2.45
CCDC30Q5VVM6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CCDC30Q5VVM6 FOXO3B-201ENST00000395675 1928 ntBASIC30.37■■■□□ 2.45
CCDC30Q5VVM6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.37■■■□□ 2.45
CCDC30Q5VVM6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.37■■■□□ 2.45
CCDC30Q5VVM6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 KRT18P24-201ENST00000344739 1156 ntBASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC30Q5VVM6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC30Q5VVM6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC30Q5VVM6 AC009299.2-201ENST00000482477 511 ntBASIC30.35■■■□□ 2.45
CCDC30Q5VVM6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.35■■■□□ 2.45
CCDC30Q5VVM6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC30Q5VVM6 AL035685.1-201ENST00000636663 812 ntBASIC30.35■■■□□ 2.45
CCDC30Q5VVM6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.35■■■□□ 2.45
CCDC30Q5VVM6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC30Q5VVM6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.34■■■□□ 2.45
CCDC30Q5VVM6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.33■■■□□ 2.45
CCDC30Q5VVM6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC30Q5VVM6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.33■■■□□ 2.45
CCDC30Q5VVM6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.33■■■□□ 2.45
CCDC30Q5VVM6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
CCDC30Q5VVM6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC30Q5VVM6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC30Q5VVM6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC30Q5VVM6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.31■■■□□ 2.44
CCDC30Q5VVM6 AC120024.1-201ENST00000562672 995 ntBASIC30.31■■■□□ 2.44
CCDC30Q5VVM6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC30Q5VVM6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC30Q5VVM6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms