Protein–RNA interactions for Protein: Q5JUQ0

FAM78A, Protein FAM78A, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78AQ5JUQ0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
FAM78AQ5JUQ0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
FAM78AQ5JUQ0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.71■■□□□ 1.55
FAM78AQ5JUQ0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
FAM78AQ5JUQ0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
FAM78AQ5JUQ0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
FAM78AQ5JUQ0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.69■■□□□ 1.54
FAM78AQ5JUQ0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.69■■□□□ 1.54
FAM78AQ5JUQ0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
FAM78AQ5JUQ0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.69■■□□□ 1.54
FAM78AQ5JUQ0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.69■■□□□ 1.54
FAM78AQ5JUQ0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.69■■□□□ 1.54
FAM78AQ5JUQ0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.69■■□□□ 1.54
FAM78AQ5JUQ0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
FAM78AQ5JUQ0 AC142086.6-201ENST00000621154 1765 ntBASIC24.68■■□□□ 1.54
FAM78AQ5JUQ0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
FAM78AQ5JUQ0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FAM78AQ5JUQ0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.67■■□□□ 1.54
FAM78AQ5JUQ0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FAM78AQ5JUQ0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
FAM78AQ5JUQ0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FAM78AQ5JUQ0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.67■■□□□ 1.54
FAM78AQ5JUQ0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.67■■□□□ 1.54
FAM78AQ5JUQ0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 AC011551.1-201ENST00000614101 683 ntBASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
FAM78AQ5JUQ0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
FAM78AQ5JUQ0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
FAM78AQ5JUQ0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FAM78AQ5JUQ0 AC131281.2-201ENST00000520478 145 ntBASIC24.65■■□□□ 1.54
FAM78AQ5JUQ0 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.65■■□□□ 1.54
FAM78AQ5JUQ0 AC010997.5-201ENST00000609182 354 ntBASIC24.65■■□□□ 1.54
FAM78AQ5JUQ0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FAM78AQ5JUQ0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
FAM78AQ5JUQ0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
FAM78AQ5JUQ0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.64■■□□□ 1.54
FAM78AQ5JUQ0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.64■■□□□ 1.54
FAM78AQ5JUQ0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.64■■□□□ 1.54
FAM78AQ5JUQ0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.64■■□□□ 1.54
FAM78AQ5JUQ0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
FAM78AQ5JUQ0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
FAM78AQ5JUQ0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.63■■□□□ 1.53
FAM78AQ5JUQ0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.63■■□□□ 1.53
FAM78AQ5JUQ0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.62■■□□□ 1.53
FAM78AQ5JUQ0 MIR935-201ENST00000401179 91 ntBASIC24.62■■□□□ 1.53
FAM78AQ5JUQ0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
FAM78AQ5JUQ0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.62■■□□□ 1.53
FAM78AQ5JUQ0 MIR638-201ENST00000385237 100 ntBASIC24.61■■□□□ 1.53
FAM78AQ5JUQ0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.61■■□□□ 1.53
FAM78AQ5JUQ0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.61■■□□□ 1.53
FAM78AQ5JUQ0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.61■■□□□ 1.53
FAM78AQ5JUQ0 AL117332.1-201ENST00000622628 974 ntBASIC24.61■■□□□ 1.53
FAM78AQ5JUQ0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.61■■□□□ 1.53
FAM78AQ5JUQ0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FAM78AQ5JUQ0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FAM78AQ5JUQ0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
FAM78AQ5JUQ0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.6■■□□□ 1.53
FAM78AQ5JUQ0 MTDHP2-201ENST00000601468 714 ntBASIC24.6■■□□□ 1.53
FAM78AQ5JUQ0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FAM78AQ5JUQ0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
FAM78AQ5JUQ0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.6■■□□□ 1.53
FAM78AQ5JUQ0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
FAM78AQ5JUQ0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
FAM78AQ5JUQ0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
FAM78AQ5JUQ0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.59■■□□□ 1.53
FAM78AQ5JUQ0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.59■■□□□ 1.53
FAM78AQ5JUQ0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.59■■□□□ 1.53
FAM78AQ5JUQ0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 MIR3621-201ENST00000580529 85 ntBASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 MIR6724-1-201ENST00000616420 92 ntBASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 MIR6724-2-201ENST00000616483 92 ntBASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 MIR6724-4-201ENST00000617390 92 ntBASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 MIR6724-3-201ENST00000622482 92 ntBASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
FAM78AQ5JUQ0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
FAM78AQ5JUQ0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.58■■□□□ 1.52
FAM78AQ5JUQ0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 AL136116.3-201ENST00000402907 1138 ntBASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 AL139246.5-201ENST00000606645 996 ntBASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
FAM78AQ5JUQ0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
FAM78AQ5JUQ0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms