Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RPL39P62891 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RPL39P62891 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.69■□□□□ 0.26
RPL39P62891 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.69■□□□□ 0.26
RPL39P62891 AC044849.2-201ENST00000606596 710 ntBASIC16.69■□□□□ 0.26
RPL39P62891 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPL39P62891 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.68■□□□□ 0.26
RPL39P62891 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.68■□□□□ 0.26
RPL39P62891 AL359504.2-201ENST00000605506 1601 ntBASIC16.68■□□□□ 0.26
RPL39P62891 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.68■□□□□ 0.26
RPL39P62891 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.68■□□□□ 0.26
RPL39P62891 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPL39P62891 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
RPL39P62891 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPL39P62891 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.67■□□□□ 0.26
RPL39P62891 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.67■□□□□ 0.26
RPL39P62891 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPL39P62891 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPL39P62891 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
RPL39P62891 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPL39P62891 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPL39P62891 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPL39P62891 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPL39P62891 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.66■□□□□ 0.26
RPL39P62891 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPL39P62891 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPL39P62891 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPL39P62891 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RPL39P62891 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RPL39P62891 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RPL39P62891 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPL39P62891 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPL39P62891 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RPL39P62891 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.65■□□□□ 0.26
RPL39P62891 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPL39P62891 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPL39P62891 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.65■□□□□ 0.26
RPL39P62891 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.65■□□□□ 0.26
RPL39P62891 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPL39P62891 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPL39P62891 MIR219A2-201ENST00000608502 1504 ntBASIC16.65■□□□□ 0.26
RPL39P62891 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPL39P62891 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPL39P62891 DUSP8P5-201ENST00000422884 1815 ntBASIC16.64■□□□□ 0.25
RPL39P62891 DUX4L29-201ENST00000425409 679 ntBASIC16.64■□□□□ 0.25
RPL39P62891 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPL39P62891 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPL39P62891 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.64■□□□□ 0.25
RPL39P62891 AL359258.2-201ENST00000564063 1566 ntBASIC16.64■□□□□ 0.25
RPL39P62891 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPL39P62891 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPL39P62891 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPL39P62891 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPL39P62891 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPL39P62891 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.63■□□□□ 0.25
RPL39P62891 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPL39P62891 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RPL39P62891 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPL39P62891 AC141586.4-201ENST00000624558 1573 ntBASIC16.63■□□□□ 0.25
RPL39P62891 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPL39P62891 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.62■□□□□ 0.25
RPL39P62891 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPL39P62891 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.62■□□□□ 0.25
RPL39P62891 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPL39P62891 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPL39P62891 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPL39P62891 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPL39P62891 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPL39P62891 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.61■□□□□ 0.25
RPL39P62891 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RPL39P62891 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.61■□□□□ 0.25
RPL39P62891 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
RPL39P62891 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPL39P62891 AL162393.1-201ENST00000437852 946 ntBASIC16.61■□□□□ 0.25
RPL39P62891 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPL39P62891 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPL39P62891 AC004812.2-201ENST00000611079 2094 ntBASIC16.61■□□□□ 0.25
RPL39P62891 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPL39P62891 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPL39P62891 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.61■□□□□ 0.25
RPL39P62891 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPL39P62891 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPL39P62891 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPL39P62891 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPL39P62891 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPL39P62891 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPL39P62891 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPL39P62891 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPL39P62891 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.6■□□□□ 0.25
RPL39P62891 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms