Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2NP61088 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE2NP61088 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.83■□□□□ 0.92
UBE2NP61088 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2NP61088 DUSP8P4-201ENST00000399538 1761 ntBASIC20.82■□□□□ 0.92
UBE2NP61088 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2NP61088 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.82■□□□□ 0.92
UBE2NP61088 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.82■□□□□ 0.92
UBE2NP61088 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
UBE2NP61088 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.82■□□□□ 0.92
UBE2NP61088 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.82■□□□□ 0.92
UBE2NP61088 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE2NP61088 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
UBE2NP61088 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
UBE2NP61088 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
UBE2NP61088 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2NP61088 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2NP61088 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
UBE2NP61088 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE2NP61088 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE2NP61088 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE2NP61088 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2NP61088 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
UBE2NP61088 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
UBE2NP61088 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBE2NP61088 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE2NP61088 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2NP61088 AC097639.1-201ENST00000565519 1891 ntBASIC20.8■□□□□ 0.92
UBE2NP61088 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2NP61088 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2NP61088 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.8■□□□□ 0.92
UBE2NP61088 LONRF2P2-201ENST00000439212 571 ntBASIC20.8■□□□□ 0.92
UBE2NP61088 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2NP61088 AC019171.1-201ENST00000601251 1056 ntBASIC20.8■□□□□ 0.92
UBE2NP61088 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBE2NP61088 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UBE2NP61088 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2NP61088 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2NP61088 YBX1P4-201ENST00000392794 808 ntBASIC20.79■□□□□ 0.92
UBE2NP61088 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2NP61088 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2NP61088 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2NP61088 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2NP61088 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.79■□□□□ 0.92
UBE2NP61088 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2NP61088 KRT8P33-201ENST00000508125 1423 ntBASIC20.78■□□□□ 0.92
UBE2NP61088 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2NP61088 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2NP61088 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2NP61088 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2NP61088 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2NP61088 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2NP61088 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2NP61088 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2NP61088 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2NP61088 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.77■□□□□ 0.92
UBE2NP61088 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2NP61088 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.77■□□□□ 0.92
UBE2NP61088 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.77■□□□□ 0.91
UBE2NP61088 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2NP61088 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2NP61088 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
UBE2NP61088 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE2NP61088 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE2NP61088 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2NP61088 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2NP61088 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2NP61088 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2NP61088 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2NP61088 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2NP61088 PVT1_1.1-201ENST00000615125 194 ntBASIC20.75■□□□□ 0.91
UBE2NP61088 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2NP61088 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2NP61088 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
UBE2NP61088 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
UBE2NP61088 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2NP61088 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2NP61088 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2NP61088 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2NP61088 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.74■□□□□ 0.91
UBE2NP61088 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2NP61088 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2NP61088 AC022616.5-201ENST00000518796 181 ntBASIC20.73■□□□□ 0.91
UBE2NP61088 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.73■□□□□ 0.91
UBE2NP61088 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2NP61088 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
UBE2NP61088 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2NP61088 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.73■□□□□ 0.91
UBE2NP61088 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2NP61088 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2NP61088 AC135731.1-201ENST00000569415 2548 ntBASIC20.72■□□□□ 0.91
UBE2NP61088 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2NP61088 AL592295.1-201ENST00000400984 884 ntBASIC20.72■□□□□ 0.91
UBE2NP61088 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
UBE2NP61088 RARRES2P1-201ENST00000474487 481 ntBASIC20.72■□□□□ 0.91
UBE2NP61088 MIR4508-201ENST00000584178 70 ntBASIC20.72■□□□□ 0.91
UBE2NP61088 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2NP61088 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2NP61088 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2NP61088 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 316.1 ms