Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SRMP19623 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SRMP19623 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRMP19623 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRMP19623 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRMP19623 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRMP19623 AC068473.5-201ENST00000616428 2072 ntBASIC20.66■□□□□ 0.9
SRMP19623 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRMP19623 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SRMP19623 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRMP19623 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRMP19623 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRMP19623 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.66■□□□□ 0.9
SRMP19623 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRMP19623 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.66■□□□□ 0.9
SRMP19623 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRMP19623 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRMP19623 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.65■□□□□ 0.9
SRMP19623 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.65■□□□□ 0.9
SRMP19623 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SRMP19623 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRMP19623 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.65■□□□□ 0.9
SRMP19623 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.65■□□□□ 0.9
SRMP19623 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRMP19623 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.65■□□□□ 0.9
SRMP19623 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SRMP19623 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SRMP19623 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SRMP19623 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRMP19623 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRMP19623 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRMP19623 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRMP19623 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SRMP19623 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRMP19623 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SRMP19623 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SRMP19623 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SRMP19623 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SRMP19623 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRMP19623 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SRMP19623 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.62■□□□□ 0.89
SRMP19623 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRMP19623 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SRMP19623 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SRMP19623 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
SRMP19623 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 HLA-V-202ENST00000446817 847 ntBASIC20.61■□□□□ 0.89
SRMP19623 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.61■□□□□ 0.89
SRMP19623 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SRMP19623 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRMP19623 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.61■□□□□ 0.89
SRMP19623 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.6■□□□□ 0.89
SRMP19623 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRMP19623 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRMP19623 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.6■□□□□ 0.89
SRMP19623 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SRMP19623 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRMP19623 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRMP19623 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRMP19623 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SRMP19623 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.59■□□□□ 0.89
SRMP19623 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRMP19623 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRMP19623 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.59■□□□□ 0.89
SRMP19623 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRMP19623 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SRMP19623 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRMP19623 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRMP19623 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRMP19623 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SRMP19623 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRMP19623 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.58■□□□□ 0.89
SRMP19623 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRMP19623 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRMP19623 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRMP19623 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.58■□□□□ 0.89
SRMP19623 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.58■□□□□ 0.89
SRMP19623 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRMP19623 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.58■□□□□ 0.89
SRMP19623 AC004812.2-201ENST00000611079 2094 ntBASIC20.58■□□□□ 0.88
SRMP19623 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SRMP19623 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms