Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATF1P18846 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF1P18846 AC068473.5-201ENST00000616428 2072 ntBASIC20.8■□□□□ 0.92
ATF1P18846 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATF1P18846 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF1P18846 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.8■□□□□ 0.92
ATF1P18846 AC097639.1-201ENST00000565519 1891 ntBASIC20.79■□□□□ 0.92
ATF1P18846 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF1P18846 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF1P18846 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATF1P18846 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.79■□□□□ 0.92
ATF1P18846 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF1P18846 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.79■□□□□ 0.92
ATF1P18846 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.79■□□□□ 0.92
ATF1P18846 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF1P18846 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ATF1P18846 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ATF1P18846 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF1P18846 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ATF1P18846 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF1P18846 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATF1P18846 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF1P18846 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF1P18846 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF1P18846 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF1P18846 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.78■□□□□ 0.92
ATF1P18846 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATF1P18846 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ATF1P18846 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATF1P18846 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.76■□□□□ 0.91
ATF1P18846 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF1P18846 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ATF1P18846 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF1P18846 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF1P18846 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF1P18846 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ATF1P18846 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF1P18846 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF1P18846 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF1P18846 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF1P18846 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF1P18846 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ATF1P18846 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF1P18846 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.75■□□□□ 0.91
ATF1P18846 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.75■□□□□ 0.91
ATF1P18846 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATF1P18846 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF1P18846 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF1P18846 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
ATF1P18846 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATF1P18846 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.74■□□□□ 0.91
ATF1P18846 LINC00543-201ENST00000567234 1845 ntBASIC20.74■□□□□ 0.91
ATF1P18846 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATF1P18846 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATF1P18846 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATF1P18846 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATF1P18846 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
ATF1P18846 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATF1P18846 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATF1P18846 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATF1P18846 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ATF1P18846 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATF1P18846 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.73■□□□□ 0.91
ATF1P18846 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.73■□□□□ 0.91
ATF1P18846 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF1P18846 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATF1P18846 AC016575.1-201ENST00000607026 382 ntBASIC20.73■□□□□ 0.91
ATF1P18846 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF1P18846 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF1P18846 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF1P18846 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.72■□□□□ 0.91
ATF1P18846 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF1P18846 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF1P18846 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATF1P18846 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATF1P18846 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.72■□□□□ 0.91
ATF1P18846 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF1P18846 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.72■□□□□ 0.91
ATF1P18846 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.72■□□□□ 0.91
ATF1P18846 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ATF1P18846 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ATF1P18846 SLC6A10P-202ENST00000431994 2058 ntBASIC20.71■□□□□ 0.91
ATF1P18846 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ATF1P18846 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.71■□□□□ 0.91
ATF1P18846 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ATF1P18846 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF1P18846 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
ATF1P18846 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ATF1P18846 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATF1P18846 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATF1P18846 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATF1P18846 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATF1P18846 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATF1P18846 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATF1P18846 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATF1P18846 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATF1P18846 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ATF1P18846 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATF1P18846 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATF1P18846 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms