Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 LINC01124-201ENST00000409786 2117 ntBASIC21.37■■□□□ 1.01
PPP1R3DO95685 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PPP1R3DO95685 MIR639-201ENST00000384974 98 ntBASIC21.37■■□□□ 1.01
PPP1R3DO95685 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP1R3DO95685 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP1R3DO95685 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP1R3DO95685 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PPP1R3DO95685 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PPP1R3DO95685 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP1R3DO95685 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP1R3DO95685 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP1R3DO95685 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP1R3DO95685 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PPP1R3DO95685 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3DO95685 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PPP1R3DO95685 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PPP1R3DO95685 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3DO95685 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3DO95685 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3DO95685 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.35■■□□□ 1.01
PPP1R3DO95685 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3DO95685 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3DO95685 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.34■■□□□ 1.01
PPP1R3DO95685 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.34■■□□□ 1.01
PPP1R3DO95685 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3DO95685 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3DO95685 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.34■■□□□ 1.01
PPP1R3DO95685 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3DO95685 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3DO95685 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3DO95685 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3DO95685 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.33■■□□□ 1.01
PPP1R3DO95685 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP1R3DO95685 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP1R3DO95685 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.33■■□□□ 1.01
PPP1R3DO95685 AC022413.1-201ENST00000624602 984 ntBASIC21.33■■□□□ 1.01
PPP1R3DO95685 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP1R3DO95685 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PPP1R3DO95685 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PPP1R3DO95685 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.33■■□□□ 1
PPP1R3DO95685 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.33■■□□□ 1
PPP1R3DO95685 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PPP1R3DO95685 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.33■■□□□ 1
PPP1R3DO95685 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.33■■□□□ 1
PPP1R3DO95685 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
PPP1R3DO95685 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.33■■□□□ 1
PPP1R3DO95685 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.33■■□□□ 1
PPP1R3DO95685 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
PPP1R3DO95685 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP1R3DO95685 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.32■■□□□ 1
PPP1R3DO95685 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP1R3DO95685 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP1R3DO95685 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.31■■□□□ 1
PPP1R3DO95685 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 ECEL1P2-201ENST00000461596 1295 ntBASIC21.31■■□□□ 1
PPP1R3DO95685 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.31■■□□□ 1
PPP1R3DO95685 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PPP1R3DO95685 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.31■■□□□ 1
PPP1R3DO95685 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3DO95685 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3DO95685 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.3■■□□□ 1
PPP1R3DO95685 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3DO95685 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3DO95685 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3DO95685 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3DO95685 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PPP1R3DO95685 RP9P-202ENST00000450133 1212 ntBASIC21.3■■□□□ 1
PPP1R3DO95685 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3DO95685 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PPP1R3DO95685 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
PPP1R3DO95685 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3DO95685 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3DO95685 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3DO95685 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.29■■□□□ 1
PPP1R3DO95685 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3DO95685 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3DO95685 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.29■■□□□ 1
PPP1R3DO95685 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3DO95685 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3DO95685 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.29■■□□□ 1
PPP1R3DO95685 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3DO95685 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3DO95685 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3DO95685 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.28■■□□□ 1
PPP1R3DO95685 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3DO95685 AC093536.1-201ENST00000569153 554 ntBASIC21.28■■□□□ 1
PPP1R3DO95685 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.28■■□□□ 1
PPP1R3DO95685 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3DO95685 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3DO95685 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3DO95685 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms