Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
BEST1O76090 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
BEST1O76090 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
BEST1O76090 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
BEST1O76090 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.11■■□□□ 1.61
BEST1O76090 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
BEST1O76090 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.11■■□□□ 1.61
BEST1O76090 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
BEST1O76090 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
BEST1O76090 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
BEST1O76090 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
BEST1O76090 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
BEST1O76090 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
BEST1O76090 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
BEST1O76090 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
BEST1O76090 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.1■■□□□ 1.61
BEST1O76090 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.09■■□□□ 1.61
BEST1O76090 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.09■■□□□ 1.61
BEST1O76090 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.09■■□□□ 1.61
BEST1O76090 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
BEST1O76090 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
BEST1O76090 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
BEST1O76090 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.08■■□□□ 1.61
BEST1O76090 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
BEST1O76090 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
BEST1O76090 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
BEST1O76090 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
BEST1O76090 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
BEST1O76090 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
BEST1O76090 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.07■■□□□ 1.6
BEST1O76090 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
BEST1O76090 YBX1P4-201ENST00000392794 808 ntBASIC25.06■■□□□ 1.6
BEST1O76090 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
BEST1O76090 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.06■■□□□ 1.6
BEST1O76090 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.06■■□□□ 1.6
BEST1O76090 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
BEST1O76090 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.06■■□□□ 1.6
BEST1O76090 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
BEST1O76090 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
BEST1O76090 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
BEST1O76090 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.05■■□□□ 1.6
BEST1O76090 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
BEST1O76090 AC103724.3-201ENST00000564481 992 ntBASIC25.05■■□□□ 1.6
BEST1O76090 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
BEST1O76090 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.05■■□□□ 1.6
BEST1O76090 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.04■■□□□ 1.6
BEST1O76090 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.04■■□□□ 1.6
BEST1O76090 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
BEST1O76090 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
BEST1O76090 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
BEST1O76090 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
BEST1O76090 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
BEST1O76090 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
BEST1O76090 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
BEST1O76090 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
BEST1O76090 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.03■■□□□ 1.6
BEST1O76090 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
BEST1O76090 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.02■■□□□ 1.6
BEST1O76090 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
BEST1O76090 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
BEST1O76090 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
BEST1O76090 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
BEST1O76090 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.01■■□□□ 1.59
BEST1O76090 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.01■■□□□ 1.59
BEST1O76090 AL451085.2-201ENST00000605085 799 ntBASIC25.01■■□□□ 1.59
BEST1O76090 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.01■■□□□ 1.59
BEST1O76090 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
BEST1O76090 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.01■■□□□ 1.59
BEST1O76090 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
BEST1O76090 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
BEST1O76090 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
BEST1O76090 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
BEST1O76090 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
BEST1O76090 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25■■□□□ 1.59
BEST1O76090 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25■■□□□ 1.59
BEST1O76090 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
BEST1O76090 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25■■□□□ 1.59
BEST1O76090 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25■■□□□ 1.59
BEST1O76090 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.99■■□□□ 1.59
BEST1O76090 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
BEST1O76090 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
BEST1O76090 FOXO3B-201ENST00000395675 1928 ntBASIC24.99■■□□□ 1.59
BEST1O76090 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
BEST1O76090 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.99■■□□□ 1.59
BEST1O76090 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
BEST1O76090 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
BEST1O76090 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
BEST1O76090 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
BEST1O76090 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
BEST1O76090 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
BEST1O76090 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
BEST1O76090 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.97■■□□□ 1.59
BEST1O76090 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
BEST1O76090 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
BEST1O76090 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
BEST1O76090 AL592295.1-201ENST00000400984 884 ntBASIC24.96■■□□□ 1.59
BEST1O76090 AC022616.5-201ENST00000518796 181 ntBASIC24.96■■□□□ 1.59
BEST1O76090 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
BEST1O76090 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
BEST1O76090 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms