Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
BRD4O60885 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
BRD4O60885 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC33.12■■■□□ 2.89
BRD4O60885 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
BRD4O60885 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
BRD4O60885 AC019069.1-201ENST00000610008 1333 ntBASIC33.12■■■□□ 2.89
BRD4O60885 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
BRD4O60885 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
BRD4O60885 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC33.12■■■□□ 2.89
BRD4O60885 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
BRD4O60885 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
BRD4O60885 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
BRD4O60885 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
BRD4O60885 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
BRD4O60885 KRT18P24-201ENST00000344739 1156 ntBASIC33.1■■■□□ 2.89
BRD4O60885 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC33.1■■■□□ 2.89
BRD4O60885 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC33.1■■■□□ 2.89
BRD4O60885 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
BRD4O60885 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC33.1■■■□□ 2.89
BRD4O60885 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC33.1■■■□□ 2.89
BRD4O60885 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
BRD4O60885 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC33.09■■■□□ 2.89
BRD4O60885 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
BRD4O60885 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC33.09■■■□□ 2.89
BRD4O60885 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC33.09■■■□□ 2.89
BRD4O60885 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
BRD4O60885 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC33.09■■■□□ 2.89
BRD4O60885 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
BRD4O60885 AC092803.2-201ENST00000564287 1899 ntBASIC33.08■■■□□ 2.89
BRD4O60885 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
BRD4O60885 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC33.08■■■□□ 2.89
BRD4O60885 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
BRD4O60885 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
BRD4O60885 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC33.07■■■□□ 2.88
BRD4O60885 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC33.07■■■□□ 2.88
BRD4O60885 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC33.07■■■□□ 2.88
BRD4O60885 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
BRD4O60885 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
BRD4O60885 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
BRD4O60885 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
BRD4O60885 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
BRD4O60885 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
BRD4O60885 AC145676.1-201ENST00000514988 2004 ntBASIC33.06■■■□□ 2.88
BRD4O60885 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
BRD4O60885 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
BRD4O60885 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
BRD4O60885 BX664725.1-201ENST00000438252 379 ntBASIC33.05■■■□□ 2.88
BRD4O60885 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC33.04■■■□□ 2.88
BRD4O60885 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC33.04■■■□□ 2.88
BRD4O60885 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
BRD4O60885 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC33.03■■■□□ 2.88
BRD4O60885 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC33.03■■■□□ 2.88
BRD4O60885 DUSP8P4-201ENST00000399538 1761 ntBASIC33.03■■■□□ 2.88
BRD4O60885 MTURN-203ENST00000409688 843 ntTSL 2 BASIC33.03■■■□□ 2.88
BRD4O60885 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
BRD4O60885 KRT125P-201ENST00000546827 989 ntBASIC33.03■■■□□ 2.88
BRD4O60885 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
BRD4O60885 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
BRD4O60885 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
BRD4O60885 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
BRD4O60885 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC33.01■■■□□ 2.88
BRD4O60885 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
BRD4O60885 AC137630.3-201ENST00000607245 391 ntBASIC33.01■■■□□ 2.88
BRD4O60885 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
BRD4O60885 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC33■■■□□ 2.87
BRD4O60885 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
BRD4O60885 MIR4787-201ENST00000607364 84 ntBASIC33■■■□□ 2.87
BRD4O60885 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
BRD4O60885 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC32.99■■■□□ 2.87
BRD4O60885 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC32.99■■■□□ 2.87
BRD4O60885 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC32.99■■■□□ 2.87
BRD4O60885 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
BRD4O60885 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC32.98■■■□□ 2.87
BRD4O60885 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC32.98■■■□□ 2.87
BRD4O60885 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
BRD4O60885 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC32.98■■■□□ 2.87
BRD4O60885 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC32.97■■■□□ 2.87
BRD4O60885 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
BRD4O60885 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
BRD4O60885 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
BRD4O60885 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
BRD4O60885 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC32.96■■■□□ 2.87
BRD4O60885 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
BRD4O60885 GRAMD4P7-201ENST00000578182 1232 ntBASIC32.96■■■□□ 2.87
BRD4O60885 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC32.96■■■□□ 2.87
BRD4O60885 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
BRD4O60885 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC32.96■■■□□ 2.87
BRD4O60885 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
BRD4O60885 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
BRD4O60885 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
BRD4O60885 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC32.95■■■□□ 2.87
BRD4O60885 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
BRD4O60885 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
BRD4O60885 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
BRD4O60885 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
BRD4O60885 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC32.95■■■□□ 2.86
BRD4O60885 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC32.95■■■□□ 2.86
BRD4O60885 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
BRD4O60885 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
BRD4O60885 UNC93B8-201ENST00000511903 705 ntBASIC32.94■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms