Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CLDN4O14493 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CLDN4O14493 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLDN4O14493 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLDN4O14493 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CLDN4O14493 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.36■■□□□ 1.17
CLDN4O14493 LONRF2P2-201ENST00000439212 571 ntBASIC22.36■■□□□ 1.17
CLDN4O14493 AC019171.1-201ENST00000601251 1056 ntBASIC22.36■■□□□ 1.17
CLDN4O14493 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.36■■□□□ 1.17
CLDN4O14493 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLDN4O14493 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CLDN4O14493 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLDN4O14493 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.35■■□□□ 1.17
CLDN4O14493 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CLDN4O14493 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CLDN4O14493 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLDN4O14493 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLDN4O14493 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN4O14493 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN4O14493 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN4O14493 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.34■■□□□ 1.17
CLDN4O14493 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN4O14493 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN4O14493 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.34■■□□□ 1.17
CLDN4O14493 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.34■■□□□ 1.17
CLDN4O14493 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.34■■□□□ 1.17
CLDN4O14493 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN4O14493 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN4O14493 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN4O14493 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLDN4O14493 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLDN4O14493 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.33■■□□□ 1.17
CLDN4O14493 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLDN4O14493 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.33■■□□□ 1.17
CLDN4O14493 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.33■■□□□ 1.17
CLDN4O14493 AC010980.1-201ENST00000587192 1142 ntBASIC22.33■■□□□ 1.17
CLDN4O14493 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLDN4O14493 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLDN4O14493 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CLDN4O14493 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLDN4O14493 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.32■■□□□ 1.16
CLDN4O14493 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.32■■□□□ 1.16
CLDN4O14493 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLDN4O14493 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CLDN4O14493 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN4O14493 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN4O14493 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN4O14493 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN4O14493 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.31■■□□□ 1.16
CLDN4O14493 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN4O14493 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN4O14493 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN4O14493 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN4O14493 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN4O14493 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN4O14493 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN4O14493 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.3■■□□□ 1.16
CLDN4O14493 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN4O14493 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
CLDN4O14493 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN4O14493 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN4O14493 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN4O14493 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.28■■□□□ 1.16
CLDN4O14493 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.28■■□□□ 1.16
CLDN4O14493 AC022616.5-201ENST00000518796 181 ntBASIC22.28■■□□□ 1.16
CLDN4O14493 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.27■■□□□ 1.16
CLDN4O14493 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN4O14493 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN4O14493 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN4O14493 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.27■■□□□ 1.16
CLDN4O14493 AL592295.1-201ENST00000400984 884 ntBASIC22.27■■□□□ 1.16
CLDN4O14493 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.27■■□□□ 1.16
CLDN4O14493 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN4O14493 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN4O14493 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN4O14493 YBX1P4-201ENST00000392794 808 ntBASIC22.26■■□□□ 1.15
CLDN4O14493 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.26■■□□□ 1.15
CLDN4O14493 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN4O14493 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN4O14493 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.26■■□□□ 1.15
CLDN4O14493 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.26■■□□□ 1.15
CLDN4O14493 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
CLDN4O14493 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN4O14493 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.25■■□□□ 1.15
CLDN4O14493 PVT1_1.1-201ENST00000615125 194 ntBASIC22.25■■□□□ 1.15
CLDN4O14493 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN4O14493 FOXO3B-201ENST00000395675 1928 ntBASIC22.25■■□□□ 1.15
CLDN4O14493 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN4O14493 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.24■■□□□ 1.15
CLDN4O14493 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN4O14493 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.24■■□□□ 1.15
CLDN4O14493 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.24■■□□□ 1.15
CLDN4O14493 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CLDN4O14493 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.23■■□□□ 1.15
CLDN4O14493 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CLDN4O14493 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.23■■□□□ 1.15
CLDN4O14493 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN4O14493 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN4O14493 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN4O14493 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms