Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 HSD17B1P1-201ENST00000590052 955 ntBASIC21.13■□□□□ 0.97
NPIPB4C9JG80 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPIPB4C9JG80 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
NPIPB4C9JG80 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 MIR6089-201ENST00000616698 64 ntBASIC21.12■□□□□ 0.97
NPIPB4C9JG80 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPB4C9JG80 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.11■□□□□ 0.97
NPIPB4C9JG80 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPB4C9JG80 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPB4C9JG80 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.11■□□□□ 0.97
NPIPB4C9JG80 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NPIPB4C9JG80 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.1■□□□□ 0.97
NPIPB4C9JG80 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NPIPB4C9JG80 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.1■□□□□ 0.97
NPIPB4C9JG80 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPIPB4C9JG80 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.1■□□□□ 0.97
NPIPB4C9JG80 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NPIPB4C9JG80 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPIPB4C9JG80 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NPIPB4C9JG80 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPB4C9JG80 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.09■□□□□ 0.97
NPIPB4C9JG80 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPB4C9JG80 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPB4C9JG80 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.08■□□□□ 0.97
NPIPB4C9JG80 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.08■□□□□ 0.97
NPIPB4C9JG80 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPB4C9JG80 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.08■□□□□ 0.97
NPIPB4C9JG80 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPB4C9JG80 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPB4C9JG80 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPB4C9JG80 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPB4C9JG80 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPB4C9JG80 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPIPB4C9JG80 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPIPB4C9JG80 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.07■□□□□ 0.96
NPIPB4C9JG80 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.07■□□□□ 0.96
NPIPB4C9JG80 AL139125.2-201ENST00000623134 1869 ntBASIC21.07■□□□□ 0.96
NPIPB4C9JG80 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPIPB4C9JG80 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPB4C9JG80 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPB4C9JG80 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPB4C9JG80 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NPIPB4C9JG80 AL592293.1-201ENST00000502889 1188 ntBASIC21.06■□□□□ 0.96
NPIPB4C9JG80 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.06■□□□□ 0.96
NPIPB4C9JG80 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPB4C9JG80 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPB4C9JG80 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.06■□□□□ 0.96
NPIPB4C9JG80 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPB4C9JG80 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NPIPB4C9JG80 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NPIPB4C9JG80 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NPIPB4C9JG80 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 AC018755.3-202ENST00000596210 929 ntBASIC21.04■□□□□ 0.96
NPIPB4C9JG80 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 AC135731.1-201ENST00000569415 2548 ntBASIC21.04■□□□□ 0.96
NPIPB4C9JG80 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPB4C9JG80 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPB4C9JG80 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.03■□□□□ 0.96
NPIPB4C9JG80 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
NPIPB4C9JG80 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.03■□□□□ 0.96
NPIPB4C9JG80 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPB4C9JG80 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.03■□□□□ 0.96
NPIPB4C9JG80 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.03■□□□□ 0.96
NPIPB4C9JG80 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPB4C9JG80 FOXO3B-201ENST00000395675 1928 ntBASIC21.02■□□□□ 0.96
NPIPB4C9JG80 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.02■□□□□ 0.96
NPIPB4C9JG80 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.02■□□□□ 0.96
NPIPB4C9JG80 RPS2P7-201ENST00000447334 885 ntBASIC21.02■□□□□ 0.96
NPIPB4C9JG80 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPB4C9JG80 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.02■□□□□ 0.96
NPIPB4C9JG80 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NPIPB4C9JG80 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPB4C9JG80 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.01■□□□□ 0.95
NPIPB4C9JG80 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.01■□□□□ 0.95
NPIPB4C9JG80 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPB4C9JG80 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPB4C9JG80 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.01■□□□□ 0.95
NPIPB4C9JG80 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPB4C9JG80 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPB4C9JG80 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPB4C9JG80 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms