Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV8-4A0A0B4J246 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-4A0A0B4J246 AC079834.2-201ENST00000609776 1949 ntBASIC16.45■□□□□ 0.22
TRAV8-4A0A0B4J246 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV8-4A0A0B4J246 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV8-4A0A0B4J246 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 DUSP8P4-201ENST00000399538 1761 ntBASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-4A0A0B4J246 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-4A0A0B4J246 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 MIR639-201ENST00000384974 98 ntBASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-4A0A0B4J246 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 AL359504.2-201ENST00000605506 1601 ntBASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAV8-4A0A0B4J246 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV8-4A0A0B4J246 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV8-4A0A0B4J246 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-4A0A0B4J246 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-4A0A0B4J246 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV8-4A0A0B4J246 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-4A0A0B4J246 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRAV8-4A0A0B4J246 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-4A0A0B4J246 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV8-4A0A0B4J246 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-4A0A0B4J246 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-4A0A0B4J246 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV8-4A0A0B4J246 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRAV8-4A0A0B4J246 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms