Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRBV9A0A0B4J1U6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV9A0A0B4J1U6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV9A0A0B4J1U6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV9A0A0B4J1U6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV9A0A0B4J1U6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV9A0A0B4J1U6 AC096887.2-201ENST00000623443 1957 ntBASIC18.81■□□□□ 0.6
TRBV9A0A0B4J1U6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRBV9A0A0B4J1U6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV9A0A0B4J1U6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV9A0A0B4J1U6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV9A0A0B4J1U6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV9A0A0B4J1U6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV9A0A0B4J1U6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV9A0A0B4J1U6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV9A0A0B4J1U6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRBV9A0A0B4J1U6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV9A0A0B4J1U6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.79■□□□□ 0.6
TRBV9A0A0B4J1U6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV9A0A0B4J1U6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV9A0A0B4J1U6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRBV9A0A0B4J1U6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV9A0A0B4J1U6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV9A0A0B4J1U6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV9A0A0B4J1U6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV9A0A0B4J1U6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV9A0A0B4J1U6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV9A0A0B4J1U6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV9A0A0B4J1U6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV9A0A0B4J1U6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV9A0A0B4J1U6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV9A0A0B4J1U6 AC009831.1-201ENST00000580420 1582 ntBASIC18.76■□□□□ 0.59
TRBV9A0A0B4J1U6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV9A0A0B4J1U6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.76■□□□□ 0.59
TRBV9A0A0B4J1U6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV9A0A0B4J1U6 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.76■□□□□ 0.59
TRBV9A0A0B4J1U6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV9A0A0B4J1U6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV9A0A0B4J1U6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRBV9A0A0B4J1U6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV9A0A0B4J1U6 LINC00543-201ENST00000567234 1845 ntBASIC18.75■□□□□ 0.59
TRBV9A0A0B4J1U6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.75■□□□□ 0.59
TRBV9A0A0B4J1U6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV9A0A0B4J1U6 AC133552.2-201ENST00000619106 1032 ntBASIC18.75■□□□□ 0.59
TRBV9A0A0B4J1U6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV9A0A0B4J1U6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV9A0A0B4J1U6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV9A0A0B4J1U6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV9A0A0B4J1U6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV9A0A0B4J1U6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV9A0A0B4J1U6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV9A0A0B4J1U6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV9A0A0B4J1U6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV9A0A0B4J1U6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV9A0A0B4J1U6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV9A0A0B4J1U6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV9A0A0B4J1U6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV9A0A0B4J1U6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV9A0A0B4J1U6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRBV9A0A0B4J1U6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV9A0A0B4J1U6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV9A0A0B4J1U6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV9A0A0B4J1U6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV9A0A0B4J1U6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV9A0A0B4J1U6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV9A0A0B4J1U6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRBV9A0A0B4J1U6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.7■□□□□ 0.58
TRBV9A0A0B4J1U6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TRBV9A0A0B4J1U6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms