Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A7Q99884 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A7Q99884 MIR219A2-201ENST00000608502 1504 ntBASIC20.59■□□□□ 0.89
SLC6A7Q99884 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC6A7Q99884 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A7Q99884 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A7Q99884 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC6A7Q99884 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC6A7Q99884 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SLC6A7Q99884 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC6A7Q99884 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A7Q99884 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC6A7Q99884 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A7Q99884 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC6A7Q99884 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A7Q99884 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC6A7Q99884 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A7Q99884 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A7Q99884 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A7Q99884 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A7Q99884 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SLC6A7Q99884 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A7Q99884 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A7Q99884 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC6A7Q99884 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A7Q99884 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC6A7Q99884 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A7Q99884 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A7Q99884 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC6A7Q99884 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A7Q99884 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A7Q99884 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC6A7Q99884 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC6A7Q99884 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A7Q99884 AL033527.3-201ENST00000566366 1196 ntBASIC20.56■□□□□ 0.88
SLC6A7Q99884 U85056.1-201ENST00000616429 682 ntBASIC20.56■□□□□ 0.88
SLC6A7Q99884 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A7Q99884 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A7Q99884 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A7Q99884 WHAMMP3-201ENST00000611636 1609 ntBASIC20.56■□□□□ 0.88
SLC6A7Q99884 AL139125.2-201ENST00000623134 1869 ntBASIC20.56■□□□□ 0.88
SLC6A7Q99884 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A7Q99884 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC6A7Q99884 AC138932.3-201ENST00000567634 1902 ntBASIC20.55■□□□□ 0.88
SLC6A7Q99884 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC6A7Q99884 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A7Q99884 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC6A7Q99884 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A7Q99884 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC6A7Q99884 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A7Q99884 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A7Q99884 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A7Q99884 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A7Q99884 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.54■□□□□ 0.88
SLC6A7Q99884 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A7Q99884 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A7Q99884 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC6A7Q99884 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A7Q99884 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC6A7Q99884 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A7Q99884 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SLC6A7Q99884 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A7Q99884 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A7Q99884 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A7Q99884 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC6A7Q99884 AC022211.4-201ENST00000625094 2161 ntBASIC20.53■□□□□ 0.88
SLC6A7Q99884 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC6A7Q99884 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC6A7Q99884 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC6A7Q99884 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A7Q99884 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC6A7Q99884 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC6A7Q99884 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A7Q99884 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A7Q99884 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A7Q99884 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC6A7Q99884 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A7Q99884 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SLC6A7Q99884 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A7Q99884 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A7Q99884 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC6A7Q99884 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A7Q99884 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A7Q99884 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A7Q99884 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A7Q99884 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SLC6A7Q99884 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A7Q99884 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A7Q99884 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A7Q99884 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A7Q99884 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A7Q99884 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A7Q99884 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A7Q99884 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A7Q99884 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A7Q99884 AC092296.2-201ENST00000589470 999 ntBASIC20.49■□□□□ 0.87
SLC6A7Q99884 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A7Q99884 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A7Q99884 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A7Q99884 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms