Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSMD1Q96PZ7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CSMD1Q96PZ7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSMD1Q96PZ7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CSMD1Q96PZ7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSMD1Q96PZ7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSMD1Q96PZ7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSMD1Q96PZ7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSMD1Q96PZ7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSMD1Q96PZ7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSMD1Q96PZ7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.62■□□□□ 0.89
CSMD1Q96PZ7 AL355001.2-201ENST00000620617 1191 ntBASIC20.62■□□□□ 0.89
CSMD1Q96PZ7 RARRES2P11-201ENST00000635158 484 ntBASIC20.62■□□□□ 0.89
CSMD1Q96PZ7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.62■□□□□ 0.89
CSMD1Q96PZ7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD1Q96PZ7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.61■□□□□ 0.89
CSMD1Q96PZ7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD1Q96PZ7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD1Q96PZ7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.61■□□□□ 0.89
CSMD1Q96PZ7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD1Q96PZ7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD1Q96PZ7 PBX2P1-201ENST00000493219 1291 ntBASIC20.61■□□□□ 0.89
CSMD1Q96PZ7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSMD1Q96PZ7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSMD1Q96PZ7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CSMD1Q96PZ7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSMD1Q96PZ7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSMD1Q96PZ7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSMD1Q96PZ7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.6■□□□□ 0.89
CSMD1Q96PZ7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSMD1Q96PZ7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.6■□□□□ 0.89
CSMD1Q96PZ7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CSMD1Q96PZ7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSMD1Q96PZ7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSMD1Q96PZ7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.59■□□□□ 0.89
CSMD1Q96PZ7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.59■□□□□ 0.89
CSMD1Q96PZ7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSMD1Q96PZ7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.59■□□□□ 0.89
CSMD1Q96PZ7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSMD1Q96PZ7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.59■□□□□ 0.89
CSMD1Q96PZ7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSMD1Q96PZ7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CSMD1Q96PZ7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CSMD1Q96PZ7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.58■□□□□ 0.88
CSMD1Q96PZ7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.58■□□□□ 0.88
CSMD1Q96PZ7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CSMD1Q96PZ7 AC010997.5-201ENST00000609182 354 ntBASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 MIR6724-1-201ENST00000616420 92 ntBASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 MIR6724-2-201ENST00000616483 92 ntBASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 MIR6724-4-201ENST00000617390 92 ntBASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 MIR6724-3-201ENST00000622482 92 ntBASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CSMD1Q96PZ7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 AC120024.1-201ENST00000562672 995 ntBASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 AC105265.2-201ENST00000467189 838 ntBASIC20.55■□□□□ 0.88
CSMD1Q96PZ7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD1Q96PZ7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD1Q96PZ7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD1Q96PZ7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD1Q96PZ7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD1Q96PZ7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.54■□□□□ 0.88
CSMD1Q96PZ7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD1Q96PZ7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CSMD1Q96PZ7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CSMD1Q96PZ7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CSMD1Q96PZ7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSMD1Q96PZ7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSMD1Q96PZ7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSMD1Q96PZ7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.53■□□□□ 0.88
CSMD1Q96PZ7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CSMD1Q96PZ7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 WHAMMP3-201ENST00000611636 1609 ntBASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms