Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 AC135983.2-203ENST00000454486 1613 ntBASIC17.41■□□□□ 0.38
CHCHD1Q96BP2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.41■□□□□ 0.38
CHCHD1Q96BP2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHCHD1Q96BP2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHCHD1Q96BP2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHCHD1Q96BP2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHCHD1Q96BP2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHCHD1Q96BP2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHCHD1Q96BP2 WHAMMP2-203ENST00000563942 1603 ntBASIC17.4■□□□□ 0.38
CHCHD1Q96BP2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHCHD1Q96BP2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.4■□□□□ 0.38
CHCHD1Q96BP2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHCHD1Q96BP2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHCHD1Q96BP2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.4■□□□□ 0.38
CHCHD1Q96BP2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHCHD1Q96BP2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHCHD1Q96BP2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHCHD1Q96BP2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHCHD1Q96BP2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHCHD1Q96BP2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHCHD1Q96BP2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHCHD1Q96BP2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHCHD1Q96BP2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHCHD1Q96BP2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.38■□□□□ 0.37
CHCHD1Q96BP2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHCHD1Q96BP2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.38■□□□□ 0.37
CHCHD1Q96BP2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHCHD1Q96BP2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC17.38■□□□□ 0.37
CHCHD1Q96BP2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.38■□□□□ 0.37
CHCHD1Q96BP2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHCHD1Q96BP2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHCHD1Q96BP2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHCHD1Q96BP2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHCHD1Q96BP2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHCHD1Q96BP2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHCHD1Q96BP2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHCHD1Q96BP2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHCHD1Q96BP2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHCHD1Q96BP2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHCHD1Q96BP2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHCHD1Q96BP2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHCHD1Q96BP2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHCHD1Q96BP2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHCHD1Q96BP2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHCHD1Q96BP2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHCHD1Q96BP2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHCHD1Q96BP2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.34■□□□□ 0.37
CHCHD1Q96BP2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHCHD1Q96BP2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHCHD1Q96BP2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.33■□□□□ 0.37
CHCHD1Q96BP2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD1Q96BP2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.33■□□□□ 0.36
CHCHD1Q96BP2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD1Q96BP2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CHCHD1Q96BP2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHCHD1Q96BP2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD1Q96BP2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD1Q96BP2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.32■□□□□ 0.36
CHCHD1Q96BP2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 LINC00565-201ENST00000562710 2331 ntBASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 PKD1P6-201ENST00000343738 4769 ntBASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD1Q96BP2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHCHD1Q96BP2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.3■□□□□ 0.36
CHCHD1Q96BP2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHCHD1Q96BP2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHCHD1Q96BP2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHCHD1Q96BP2 AL024507.2-201ENST00000606070 2574 ntBASIC17.3■□□□□ 0.36
CHCHD1Q96BP2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHCHD1Q96BP2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CHCHD1Q96BP2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHCHD1Q96BP2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.29■□□□□ 0.36
CHCHD1Q96BP2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHCHD1Q96BP2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms