Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRTCAP3Q53RY4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KRTCAP3Q53RY4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 AC008406.3-201ENST00000620001 1374 ntBASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 AC019069.1-201ENST00000610008 1333 ntBASIC21.54■■□□□ 1.04
KRTCAP3Q53RY4 AC021242.3-201ENST00000607598 1377 ntBASIC21.53■■□□□ 1.04
KRTCAP3Q53RY4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.53■■□□□ 1.04
KRTCAP3Q53RY4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRTCAP3Q53RY4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.53■■□□□ 1.04
KRTCAP3Q53RY4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.53■■□□□ 1.04
KRTCAP3Q53RY4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.53■■□□□ 1.04
KRTCAP3Q53RY4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRTCAP3Q53RY4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KRTCAP3Q53RY4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
KRTCAP3Q53RY4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRTCAP3Q53RY4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRTCAP3Q53RY4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.52■■□□□ 1.04
KRTCAP3Q53RY4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.52■■□□□ 1.04
KRTCAP3Q53RY4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRTCAP3Q53RY4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRTCAP3Q53RY4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.52■■□□□ 1.04
KRTCAP3Q53RY4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.52■■□□□ 1.04
KRTCAP3Q53RY4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
KRTCAP3Q53RY4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KRTCAP3Q53RY4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
KRTCAP3Q53RY4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
KRTCAP3Q53RY4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRTCAP3Q53RY4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.51■■□□□ 1.03
KRTCAP3Q53RY4 KRT16P3-201ENST00000439127 1283 ntBASIC21.51■■□□□ 1.03
KRTCAP3Q53RY4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.51■■□□□ 1.03
KRTCAP3Q53RY4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.51■■□□□ 1.03
KRTCAP3Q53RY4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRTCAP3Q53RY4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.51■■□□□ 1.03
KRTCAP3Q53RY4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
KRTCAP3Q53RY4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRTCAP3Q53RY4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
KRTCAP3Q53RY4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
KRTCAP3Q53RY4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRTCAP3Q53RY4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRTCAP3Q53RY4 UNC93B8-201ENST00000511903 705 ntBASIC21.5■■□□□ 1.03
KRTCAP3Q53RY4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRTCAP3Q53RY4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
KRTCAP3Q53RY4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
KRTCAP3Q53RY4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KRTCAP3Q53RY4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRTCAP3Q53RY4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
KRTCAP3Q53RY4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.48■■□□□ 1.03
KRTCAP3Q53RY4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRTCAP3Q53RY4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRTCAP3Q53RY4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
KRTCAP3Q53RY4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRTCAP3Q53RY4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRTCAP3Q53RY4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRTCAP3Q53RY4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.47■■□□□ 1.03
KRTCAP3Q53RY4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRTCAP3Q53RY4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRTCAP3Q53RY4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 AC092028.1-203ENST00000608262 953 ntBASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRTCAP3Q53RY4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 AC011551.1-201ENST00000614101 683 ntBASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRTCAP3Q53RY4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
KRTCAP3Q53RY4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRTCAP3Q53RY4 AC142086.6-201ENST00000621154 1765 ntBASIC21.44■■□□□ 1.02
KRTCAP3Q53RY4 TSPY9P-201ENST00000440215 945 ntBASIC21.44■■□□□ 1.02
KRTCAP3Q53RY4 TSPY11P-201ENST00000442607 1045 ntBASIC21.44■■□□□ 1.02
KRTCAP3Q53RY4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
KRTCAP3Q53RY4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.44■■□□□ 1.02
KRTCAP3Q53RY4 MIR4281-201ENST00000580852 62 ntBASIC21.44■■□□□ 1.02
KRTCAP3Q53RY4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRTCAP3Q53RY4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms