Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 AC097639.1-201ENST00000565519 1891 ntBASIC19.21■□□□□ 0.67
VMA21Q3ZAQ7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VMA21Q3ZAQ7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VMA21Q3ZAQ7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VMA21Q3ZAQ7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VMA21Q3ZAQ7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.2■□□□□ 0.66
VMA21Q3ZAQ7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VMA21Q3ZAQ7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VMA21Q3ZAQ7 GPX1-201ENST00000419349 1106 ntBASIC19.2■□□□□ 0.66
VMA21Q3ZAQ7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VMA21Q3ZAQ7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
VMA21Q3ZAQ7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VMA21Q3ZAQ7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VMA21Q3ZAQ7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
VMA21Q3ZAQ7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 AC093536.1-201ENST00000569153 554 ntBASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
VMA21Q3ZAQ7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.18■□□□□ 0.66
VMA21Q3ZAQ7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.18■□□□□ 0.66
VMA21Q3ZAQ7 AC142381.3-201ENST00000568208 1670 ntBASIC19.18■□□□□ 0.66
VMA21Q3ZAQ7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VMA21Q3ZAQ7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
VMA21Q3ZAQ7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VMA21Q3ZAQ7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.17■□□□□ 0.66
VMA21Q3ZAQ7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VMA21Q3ZAQ7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VMA21Q3ZAQ7 AC007029.1-201ENST00000604183 313 ntBASIC19.17■□□□□ 0.66
VMA21Q3ZAQ7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VMA21Q3ZAQ7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.16■□□□□ 0.66
VMA21Q3ZAQ7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VMA21Q3ZAQ7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VMA21Q3ZAQ7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VMA21Q3ZAQ7 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.15■□□□□ 0.66
VMA21Q3ZAQ7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.15■□□□□ 0.66
VMA21Q3ZAQ7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VMA21Q3ZAQ7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VMA21Q3ZAQ7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
VMA21Q3ZAQ7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VMA21Q3ZAQ7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VMA21Q3ZAQ7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.14■□□□□ 0.65
VMA21Q3ZAQ7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.14■□□□□ 0.65
VMA21Q3ZAQ7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VMA21Q3ZAQ7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VMA21Q3ZAQ7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.14■□□□□ 0.65
VMA21Q3ZAQ7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VMA21Q3ZAQ7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VMA21Q3ZAQ7 AC022211.4-201ENST00000625094 2161 ntBASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VMA21Q3ZAQ7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VMA21Q3ZAQ7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VMA21Q3ZAQ7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VMA21Q3ZAQ7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VMA21Q3ZAQ7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
VMA21Q3ZAQ7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
VMA21Q3ZAQ7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VMA21Q3ZAQ7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.11■□□□□ 0.65
VMA21Q3ZAQ7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
VMA21Q3ZAQ7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms