Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RSPO4Q2I0M5 KRT18P10-201ENST00000388836 1287 ntBASIC23.55■■□□□ 1.36
RSPO4Q2I0M5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.55■■□□□ 1.36
RSPO4Q2I0M5 AC090192.1-201ENST00000517740 490 ntBASIC23.55■■□□□ 1.36
RSPO4Q2I0M5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.55■■□□□ 1.36
RSPO4Q2I0M5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RSPO4Q2I0M5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RSPO4Q2I0M5 AC097381.1-201ENST00000429019 1296 ntBASIC23.54■■□□□ 1.36
RSPO4Q2I0M5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.54■■□□□ 1.36
RSPO4Q2I0M5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.54■■□□□ 1.36
RSPO4Q2I0M5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RSPO4Q2I0M5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.53■■□□□ 1.36
RSPO4Q2I0M5 MIR4281-201ENST00000580852 62 ntBASIC23.53■■□□□ 1.36
RSPO4Q2I0M5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.53■■□□□ 1.36
RSPO4Q2I0M5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RSPO4Q2I0M5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RSPO4Q2I0M5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RSPO4Q2I0M5 AC087623.3-201ENST00000607047 1098 ntBASIC23.52■■□□□ 1.36
RSPO4Q2I0M5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RSPO4Q2I0M5 AL355001.2-201ENST00000620617 1191 ntBASIC23.52■■□□□ 1.36
RSPO4Q2I0M5 EDA-201ENST00000338901 1233 ntBASIC23.51■■□□□ 1.35
RSPO4Q2I0M5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RSPO4Q2I0M5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RSPO4Q2I0M5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RSPO4Q2I0M5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RSPO4Q2I0M5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.51■■□□□ 1.35
RSPO4Q2I0M5 RARRES2P11-201ENST00000635158 484 ntBASIC23.5■■□□□ 1.35
RSPO4Q2I0M5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.5■■□□□ 1.35
RSPO4Q2I0M5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.5■■□□□ 1.35
RSPO4Q2I0M5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RSPO4Q2I0M5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
RSPO4Q2I0M5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.49■■□□□ 1.35
RSPO4Q2I0M5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.49■■□□□ 1.35
RSPO4Q2I0M5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RSPO4Q2I0M5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.48■■□□□ 1.35
RSPO4Q2I0M5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.48■■□□□ 1.35
RSPO4Q2I0M5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
RSPO4Q2I0M5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
RSPO4Q2I0M5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.48■■□□□ 1.35
RSPO4Q2I0M5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RSPO4Q2I0M5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RSPO4Q2I0M5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.47■■□□□ 1.35
RSPO4Q2I0M5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.47■■□□□ 1.35
RSPO4Q2I0M5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.47■■□□□ 1.35
RSPO4Q2I0M5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.47■■□□□ 1.35
RSPO4Q2I0M5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.47■■□□□ 1.35
RSPO4Q2I0M5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
RSPO4Q2I0M5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RSPO4Q2I0M5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RSPO4Q2I0M5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RSPO4Q2I0M5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.46■■□□□ 1.35
RSPO4Q2I0M5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.45■■□□□ 1.34
RSPO4Q2I0M5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.45■■□□□ 1.34
RSPO4Q2I0M5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RSPO4Q2I0M5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RSPO4Q2I0M5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.45■■□□□ 1.34
RSPO4Q2I0M5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.45■■□□□ 1.34
RSPO4Q2I0M5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RSPO4Q2I0M5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RSPO4Q2I0M5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RSPO4Q2I0M5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RSPO4Q2I0M5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RSPO4Q2I0M5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RSPO4Q2I0M5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RSPO4Q2I0M5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
RSPO4Q2I0M5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.43■■□□□ 1.34
RSPO4Q2I0M5 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.43■■□□□ 1.34
RSPO4Q2I0M5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
RSPO4Q2I0M5 AC024257.2-201ENST00000549699 147 ntBASIC23.43■■□□□ 1.34
RSPO4Q2I0M5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.43■■□□□ 1.34
RSPO4Q2I0M5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
RSPO4Q2I0M5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RSPO4Q2I0M5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
RSPO4Q2I0M5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
RSPO4Q2I0M5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.42■■□□□ 1.34
RSPO4Q2I0M5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RSPO4Q2I0M5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.42■■□□□ 1.34
RSPO4Q2I0M5 AL136967.2-201ENST00000623968 743 ntBASIC23.42■■□□□ 1.34
RSPO4Q2I0M5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RSPO4Q2I0M5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.41■■□□□ 1.34
RSPO4Q2I0M5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
RSPO4Q2I0M5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RSPO4Q2I0M5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RSPO4Q2I0M5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RSPO4Q2I0M5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.4■■□□□ 1.34
RSPO4Q2I0M5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RSPO4Q2I0M5 ABCB10P1-201ENST00000614297 2181 ntBASIC23.4■■□□□ 1.34
RSPO4Q2I0M5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.4■■□□□ 1.34
RSPO4Q2I0M5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RSPO4Q2I0M5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
RSPO4Q2I0M5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RSPO4Q2I0M5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
RSPO4Q2I0M5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RSPO4Q2I0M5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.39■■□□□ 1.33
RSPO4Q2I0M5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RSPO4Q2I0M5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.39■■□□□ 1.33
RSPO4Q2I0M5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.39■■□□□ 1.33
RSPO4Q2I0M5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.39■■□□□ 1.33
RSPO4Q2I0M5 AF213884.3-201ENST00000563833 479 ntBASIC23.39■■□□□ 1.33
RSPO4Q2I0M5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms