Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV8-4A0A0B4J246 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-4A0A0B4J246 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV8-4A0A0B4J246 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV8-4A0A0B4J246 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-4A0A0B4J246 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV8-4A0A0B4J246 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV8-4A0A0B4J246 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-4A0A0B4J246 AC012676.1-201ENST00000574705 1949 ntBASIC16.53■□□□□ 0.24
TRAV8-4A0A0B4J246 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-4A0A0B4J246 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-4A0A0B4J246 AL359258.2-201ENST00000564063 1566 ntBASIC16.53■□□□□ 0.24
TRAV8-4A0A0B4J246 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-4A0A0B4J246 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV8-4A0A0B4J246 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV8-4A0A0B4J246 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV8-4A0A0B4J246 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-4A0A0B4J246 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-4A0A0B4J246 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-4A0A0B4J246 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-4A0A0B4J246 AC016575.1-201ENST00000607026 382 ntBASIC16.52■□□□□ 0.24
TRAV8-4A0A0B4J246 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV8-4A0A0B4J246 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-4A0A0B4J246 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-4A0A0B4J246 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV8-4A0A0B4J246 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-4A0A0B4J246 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-4A0A0B4J246 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV8-4A0A0B4J246 AC145676.1-201ENST00000514988 2004 ntBASIC16.52■□□□□ 0.23
TRAV8-4A0A0B4J246 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 MIR7108-201ENST00000614319 87 ntBASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-4A0A0B4J246 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 CLDN5-201ENST00000403084 2357 ntBASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TRAV8-4A0A0B4J246 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-4A0A0B4J246 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV8-4A0A0B4J246 AC091060.1-201ENST00000623524 1766 ntBASIC16.49■□□□□ 0.23
TRAV8-4A0A0B4J246 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-4A0A0B4J246 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-4A0A0B4J246 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-4A0A0B4J246 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV8-4A0A0B4J246 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-4A0A0B4J246 AC092803.2-201ENST00000564287 1899 ntBASIC16.48■□□□□ 0.23
TRAV8-4A0A0B4J246 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-4A0A0B4J246 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-4A0A0B4J246 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-4A0A0B4J246 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRAV8-4A0A0B4J246 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-4A0A0B4J246 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV8-4A0A0B4J246 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV8-4A0A0B4J246 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-4A0A0B4J246 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-4A0A0B4J246 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-4A0A0B4J246 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms