Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
LRRC3BQ96PB8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
LRRC3BQ96PB8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LRRC3BQ96PB8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.98■■□□□ 1.59
LRRC3BQ96PB8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.98■■□□□ 1.59
LRRC3BQ96PB8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.98■■□□□ 1.59
LRRC3BQ96PB8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
LRRC3BQ96PB8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.97■■□□□ 1.59
LRRC3BQ96PB8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC3BQ96PB8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC3BQ96PB8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
LRRC3BQ96PB8 AC142472.1-201ENST00000612013 1741 ntBASIC24.97■■□□□ 1.59
LRRC3BQ96PB8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LRRC3BQ96PB8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.96■■□□□ 1.59
LRRC3BQ96PB8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.96■■□□□ 1.59
LRRC3BQ96PB8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.95■■□□□ 1.58
LRRC3BQ96PB8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRRC3BQ96PB8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LRRC3BQ96PB8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
LRRC3BQ96PB8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRRC3BQ96PB8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
LRRC3BQ96PB8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
LRRC3BQ96PB8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LRRC3BQ96PB8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.93■■□□□ 1.58
LRRC3BQ96PB8 Z92544.1-202ENST00000571933 1220 ntBASIC24.93■■□□□ 1.58
LRRC3BQ96PB8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
LRRC3BQ96PB8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.92■■□□□ 1.58
LRRC3BQ96PB8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.92■■□□□ 1.58
LRRC3BQ96PB8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRC3BQ96PB8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRC3BQ96PB8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRC3BQ96PB8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LRRC3BQ96PB8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LRRC3BQ96PB8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LRRC3BQ96PB8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.91■■□□□ 1.58
LRRC3BQ96PB8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
LRRC3BQ96PB8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.91■■□□□ 1.58
LRRC3BQ96PB8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LRRC3BQ96PB8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LRRC3BQ96PB8 AP004609.3-201ENST00000610705 1884 ntBASIC24.9■■□□□ 1.58
LRRC3BQ96PB8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.9■■□□□ 1.58
LRRC3BQ96PB8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.9■■□□□ 1.58
LRRC3BQ96PB8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.9■■□□□ 1.58
LRRC3BQ96PB8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRRC3BQ96PB8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.89■■□□□ 1.58
LRRC3BQ96PB8 KRT18P10-201ENST00000388836 1287 ntBASIC24.89■■□□□ 1.58
LRRC3BQ96PB8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
LRRC3BQ96PB8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.58
LRRC3BQ96PB8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.89■■□□□ 1.57
LRRC3BQ96PB8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
LRRC3BQ96PB8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
LRRC3BQ96PB8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.57
LRRC3BQ96PB8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRRC3BQ96PB8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRRC3BQ96PB8 AC022616.5-201ENST00000518796 181 ntBASIC24.88■■□□□ 1.57
LRRC3BQ96PB8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRRC3BQ96PB8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
LRRC3BQ96PB8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.87■■□□□ 1.57
LRRC3BQ96PB8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LRRC3BQ96PB8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LRRC3BQ96PB8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 KRT18P24-201ENST00000344739 1156 ntBASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRRC3BQ96PB8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRRC3BQ96PB8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.85■■□□□ 1.57
LRRC3BQ96PB8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.85■■□□□ 1.57
LRRC3BQ96PB8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRRC3BQ96PB8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRRC3BQ96PB8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRRC3BQ96PB8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
LRRC3BQ96PB8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.84■■□□□ 1.57
LRRC3BQ96PB8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.84■■□□□ 1.57
LRRC3BQ96PB8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.84■■□□□ 1.57
LRRC3BQ96PB8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRRC3BQ96PB8 MIR4787-201ENST00000607364 84 ntBASIC24.83■■□□□ 1.57
LRRC3BQ96PB8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRRC3BQ96PB8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRRC3BQ96PB8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRRC3BQ96PB8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
LRRC3BQ96PB8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LRRC3BQ96PB8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LRRC3BQ96PB8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
LRRC3BQ96PB8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.82■■□□□ 1.56
LRRC3BQ96PB8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LRRC3BQ96PB8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.81■■□□□ 1.56
LRRC3BQ96PB8 AC120024.1-201ENST00000562672 995 ntBASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms