Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LINC00052Q96N35 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00052Q96N35 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LINC00052Q96N35 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.65■□□□□ 0.74
LINC00052Q96N35 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00052Q96N35 C9orf163-202ENST00000624034 2573 ntBASIC19.65■□□□□ 0.74
LINC00052Q96N35 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LINC00052Q96N35 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.64■□□□□ 0.74
LINC00052Q96N35 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00052Q96N35 MIR762-201ENST00000390236 83 ntBASIC19.64■□□□□ 0.73
LINC00052Q96N35 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00052Q96N35 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00052Q96N35 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.64■□□□□ 0.73
LINC00052Q96N35 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LINC00052Q96N35 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00052Q96N35 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00052Q96N35 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00052Q96N35 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00052Q96N35 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00052Q96N35 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00052Q96N35 AL117328.2-201ENST00000624617 1940 ntBASIC19.63■□□□□ 0.73
LINC00052Q96N35 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.63■□□□□ 0.73
LINC00052Q96N35 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00052Q96N35 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00052Q96N35 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00052Q96N35 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LINC00052Q96N35 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00052Q96N35 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00052Q96N35 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LINC00052Q96N35 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC00052Q96N35 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00052Q96N35 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00052Q96N35 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC00052Q96N35 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00052Q96N35 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.61■□□□□ 0.73
LINC00052Q96N35 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00052Q96N35 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.61■□□□□ 0.73
LINC00052Q96N35 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LINC00052Q96N35 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LINC00052Q96N35 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LINC00052Q96N35 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC00052Q96N35 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00052Q96N35 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.61■□□□□ 0.73
LINC00052Q96N35 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00052Q96N35 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00052Q96N35 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
LINC00052Q96N35 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00052Q96N35 SUZ12P1-203ENST00000578195 985 ntBASIC19.6■□□□□ 0.73
LINC00052Q96N35 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.6■□□□□ 0.73
LINC00052Q96N35 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LINC00052Q96N35 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00052Q96N35 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.59■□□□□ 0.73
LINC00052Q96N35 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LINC00052Q96N35 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00052Q96N35 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.59■□□□□ 0.73
LINC00052Q96N35 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00052Q96N35 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
LINC00052Q96N35 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00052Q96N35 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC00052Q96N35 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00052Q96N35 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.59■□□□□ 0.73
LINC00052Q96N35 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.58■□□□□ 0.73
LINC00052Q96N35 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC00052Q96N35 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.58■□□□□ 0.73
LINC00052Q96N35 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.58■□□□□ 0.73
LINC00052Q96N35 C1orf229-201ENST00000623686 2258 ntBASIC19.58■□□□□ 0.73
LINC00052Q96N35 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC00052Q96N35 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.58■□□□□ 0.72
LINC00052Q96N35 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LINC00052Q96N35 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LINC00052Q96N35 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LINC00052Q96N35 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LINC00052Q96N35 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00052Q96N35 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC00052Q96N35 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00052Q96N35 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00052Q96N35 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.57■□□□□ 0.72
LINC00052Q96N35 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00052Q96N35 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00052Q96N35 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LINC00052Q96N35 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00052Q96N35 AC005559.1-201ENST00000589661 871 ntBASIC19.56■□□□□ 0.72
LINC00052Q96N35 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00052Q96N35 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LINC00052Q96N35 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LINC00052Q96N35 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LINC00052Q96N35 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00052Q96N35 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00052Q96N35 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.56■□□□□ 0.72
LINC00052Q96N35 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00052Q96N35 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LINC00052Q96N35 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.55■□□□□ 0.72
LINC00052Q96N35 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00052Q96N35 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00052Q96N35 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
LINC00052Q96N35 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00052Q96N35 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00052Q96N35 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00052Q96N35 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00052Q96N35 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms