Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.59■■□□□ 1.37
PDLIM5Q96HC4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM5Q96HC4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM5Q96HC4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM5Q96HC4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM5Q96HC4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PDLIM5Q96HC4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.58■■□□□ 1.37
PDLIM5Q96HC4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM5Q96HC4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PDLIM5Q96HC4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM5Q96HC4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.57■■□□□ 1.36
PDLIM5Q96HC4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM5Q96HC4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM5Q96HC4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PDLIM5Q96HC4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.56■■□□□ 1.36
PDLIM5Q96HC4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PDLIM5Q96HC4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.56■■□□□ 1.36
PDLIM5Q96HC4 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.56■■□□□ 1.36
PDLIM5Q96HC4 AC007029.1-201ENST00000604183 313 ntBASIC23.56■■□□□ 1.36
PDLIM5Q96HC4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDLIM5Q96HC4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDLIM5Q96HC4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.56■■□□□ 1.36
PDLIM5Q96HC4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.56■■□□□ 1.36
PDLIM5Q96HC4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDLIM5Q96HC4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDLIM5Q96HC4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDLIM5Q96HC4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
PDLIM5Q96HC4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.55■■□□□ 1.36
PDLIM5Q96HC4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDLIM5Q96HC4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PDLIM5Q96HC4 AC093536.1-201ENST00000569153 554 ntBASIC23.54■■□□□ 1.36
PDLIM5Q96HC4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PDLIM5Q96HC4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDLIM5Q96HC4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDLIM5Q96HC4 AC097639.1-201ENST00000565519 1891 ntBASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PDLIM5Q96HC4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
PDLIM5Q96HC4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PDLIM5Q96HC4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.52■■□□□ 1.36
PDLIM5Q96HC4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDLIM5Q96HC4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.52■■□□□ 1.36
PDLIM5Q96HC4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDLIM5Q96HC4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PDLIM5Q96HC4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.51■■□□□ 1.35
PDLIM5Q96HC4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDLIM5Q96HC4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDLIM5Q96HC4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.51■■□□□ 1.35
PDLIM5Q96HC4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.51■■□□□ 1.35
PDLIM5Q96HC4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDLIM5Q96HC4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.5■■□□□ 1.35
PDLIM5Q96HC4 RAP2CP1-202ENST00000605179 643 ntBASIC23.5■■□□□ 1.35
PDLIM5Q96HC4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDLIM5Q96HC4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDLIM5Q96HC4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDLIM5Q96HC4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.49■■□□□ 1.35
PDLIM5Q96HC4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDLIM5Q96HC4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.49■■□□□ 1.35
PDLIM5Q96HC4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDLIM5Q96HC4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDLIM5Q96HC4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDLIM5Q96HC4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDLIM5Q96HC4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.48■■□□□ 1.35
PDLIM5Q96HC4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PDLIM5Q96HC4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDLIM5Q96HC4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDLIM5Q96HC4 AC142381.3-201ENST00000568208 1670 ntBASIC23.48■■□□□ 1.35
PDLIM5Q96HC4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.47■■□□□ 1.35
PDLIM5Q96HC4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.47■■□□□ 1.35
PDLIM5Q96HC4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PDLIM5Q96HC4 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.47■■□□□ 1.35
PDLIM5Q96HC4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
PDLIM5Q96HC4 RNF126P1-201ENST00000567452 1320 ntBASIC23.47■■□□□ 1.35
PDLIM5Q96HC4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PDLIM5Q96HC4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
PDLIM5Q96HC4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.47■■□□□ 1.35
PDLIM5Q96HC4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 AC026202.3-201ENST00000600805 1127 ntBASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDLIM5Q96HC4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PDLIM5Q96HC4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
PDLIM5Q96HC4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PDLIM5Q96HC4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
PDLIM5Q96HC4 AC022211.4-201ENST00000625094 2161 ntBASIC23.45■■□□□ 1.34
PDLIM5Q96HC4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDLIM5Q96HC4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms